Gene Information

Name : thiC (Smlt3909)
Accession : YP_001973600.1
Strain : Stenotrophomonas maltophilia K279a
Genome accession: NC_010943
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 3999760 - 4001604 bp
Length : 1845 bp
Strand : -
Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine

DNA sequence :
ATGAACGCACAGCTCTCCGCCCTGCAGCAACAGGCCCAGCAACTCTCCGCATCCGTGACCCGGCCCATTCCCGGCTCGCG
CAAGATCCACGTGCCCGGTTCACGCCCGGATCTGCAGGTGCCGATGCGCGAGATCGCGCTGACCCGTACGCCGACGCTGT
TCGGCGGCGAAGAGAATGCGCCGGTGACCGTTTACGACACGTCGGGCCCGTACACCGACCCGGAGGTGCGCATCGATCTG
TCCGCCGGTTTGCCGGCACTGCGTCGCGGCTGGGTGGAAGAGCGCGGTGATACCGAGCAGCTCGAAGGACTGAGTTCTTC
GTTCGGTCGCGATCGCGAGCATGACCCGAAGCTTGACGCGGTGCGTTTCCCCGCGCGCAGCCTGCCACGCCGTGCACGTG
CCGGTGCCAACGTCACCCAGATGCATTACGCGCGCCGCGGCATCATCACGCCGGAAATGGAATTCGTCGCCATCCGCGAG
AACCAGCGCCTGGACGCGATCCGCGATGCCGGCCTGCTGCAGCAGCACCCGGGCGAGGCCTTCGGTGCGTCGATCCAGAA
AGTCATCACCCCGGAGTTCGTGCGCGACGAAATCGCCCGTGGCCGTGCGGTGCTGCCCAACAACATCAACCACCCGGAAA
GCGAGCCGATGATCATCGGCCGCAATTTCCTGACCAAGATCAACGCCAACATCGGCAACAGCGCGGTGTCTTCCGGCATC
GCCGAGGAAGTGGAGAAGCTGGTGTGGGCGATCCGCTGGGGCGGTGACACGGTGATGGACCTGTCCACCGGCAAGCACAT
CCACGAGACGCGCGAATGGATCATCCGCAACTCGCCGGTGGCGATCGGTACCGTGCCGATCTACCAGGCCCTGGAGAAGG
TTGACGGCCGCGCCGAGGCACTGACCTGGGAGATCTTCCGCGACACCCTGATCGAGCAGGCCGAGCAGGGCGTGGACTAC
TTCACCATCCACGCTGGCGTGCTGCTGCGCTACGTGCCGCTTACCGCCAAGCGTGTTACCGGCATCGTCAGCCGCGGCGG
CTCGATCATGGCCAAGTGGTGCCTGGCGCACCACAAGGAGAACTTCCTCTACACGCATTTCGAAGACATCTGCGAAATCA
TGAAGGCCTACGACGTGACCTTCTCGCTGGGCGACGGCCTGCGCCCGGGTTGCATCGCTGATGCCAACGACGCGGCGCAG
TTCGGCGAACTGGAAACGCTGGGTGAACTGACGAAGATCGCCTGGAAACACGATGTGCAGACCATGATCGAAGGCCCCGG
CCACGTGCCGATGCAGCTGATCAAGGAAAACATGGACAAGCAGCTGCGCGAATGCGGCGAAGCGCCGTTCTACACGCTGG
GGCCGCTGACGACCGACATCGCGCCGGGCTACGACCACATCACCAGTGCGATCGGCGCGGCGATGATCGGCTGGTTTGGC
ACGGCCATGCTCTGCTACGTGACGCCGAAGGAGCACCTGGGCCTGCCCAACCGCCAGGACGTGCGCGACGGCATCATGGC
TTACCGCATTGCCGCGCACGCGGCCGACCTGGCCAAGGGGCATCCGGGCGCACAGGTACGCGACAACGCGCTGAGCAAGG
CGCGCTTCGAGTTCCGCTGGGAAGACCAGTTCCACCTGGGCCTGGATCCGGAAAAGGCCAAGGAATTCCACGACGAGACG
TTGCCGAAGGACGCGCACAAGCTGGCCCACTTCTGCTCGATGTGCGGACCGCACTTCTGTTCGATGAAGATCACCCAGGA
CGTGCGCGACTACGCCGAGGCCGGCATGAAGGAGAAGTCGCAGGAGTTCCGTGCTGGCGGGGCCGAGGTCTACCGCCAGG
GGTGA

Protein sequence :
MNAQLSALQQQAQQLSASVTRPIPGSRKIHVPGSRPDLQVPMREIALTRTPTLFGGEENAPVTVYDTSGPYTDPEVRIDL
SAGLPALRRGWVEERGDTEQLEGLSSSFGRDREHDPKLDAVRFPARSLPRRARAGANVTQMHYARRGIITPEMEFVAIRE
NQRLDAIRDAGLLQQHPGEAFGASIQKVITPEFVRDEIARGRAVLPNNINHPESEPMIIGRNFLTKINANIGNSAVSSGI
AEEVEKLVWAIRWGGDTVMDLSTGKHIHETREWIIRNSPVAIGTVPIYQALEKVDGRAEALTWEIFRDTLIEQAEQGVDY
FTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAHHKENFLYTHFEDICEIMKAYDVTFSLGDGLRPGCIADANDAAQ
FGELETLGELTKIAWKHDVQTMIEGPGHVPMQLIKENMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFG
TAMLCYVTPKEHLGLPNRQDVRDGIMAYRIAAHAADLAKGHPGAQVRDNALSKARFEFRWEDQFHLGLDPEKAKEFHDET
LPKDAHKLAHFCSMCGPHFCSMKITQDVRDYAEAGMKEKSQEFRAGGAEVYRQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 74
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 74
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 72