Gene Information

Name : clpB (Smlt3732)
Accession : YP_001973432.1
Strain : Stenotrophomonas maltophilia K279a
Genome accession: NC_010943
Putative virulence/resistance : Unknown
Product : heat shock chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 3806460 - 3809045 bp
Length : 2586 bp
Strand : -
Note : similarity:fasta; SBG2374; sbongori; ClpB protein (heat shock protein f84.1); length 857 aa; id=71.6%; E()=3.2e-216; 857 aa overlap; query 1-857 aa; subject 1-854 aa; similarity:fasta; STY2849; styphi; ClpB protein (heat shock protein f84.1); length 857 a

DNA sequence :
ATGCGGATGGACAAGCTCACCTCGCGTTTCCAGCAGGCGCTGGCAGACGCACAGTCGCTGGCCGTGGGCCGCGACAACAG
CATCATCGAACCGGTTCACCTGTTCAGCGCGCTGCTGGACCAGCAGGGTGGCAGCACGCGCCCGCTGCTGGCCCAGGCCG
GGGTGAACGTGCCGGTGCTGCGCGAGCGCCTGACCGAGGCGCTGGATGCGCTGCCGAAGGTGTCCGGCCAGGCCGGCAAC
GTCTCGATGGGCAACGACCTGGGGCGCCTGCTGAACCAGACCGACAAGCTGGCCCAGCAGCACGGGGATGCCTTCATTGC
CAGCGAGTGGTTCGTGCTGGCGGCGCTGGACGACGGCGGCACGCTGGGTATGGCGCTGCGCGCCGCCGGTGCCGACAAGA
CCCGCCTGCAGGCGGCCATCGACAAGCTGCGCGGCGGCGAGAACGTGCAGTCGGAGAATGCCGAGGAACAGCGCCAGGCG
CTGGAGAAATACACCATCGACCTGACCGCGCGTGCCGAGAGCGGCAAGCTCGACCCGGTGATCGGCCGTGACGAGGAAAT
CCGCCGCACCATCCAGGTGCTGCAGCGCCGGACCAAGAACAACCCGGTGCTGATCGGCGAACCCGGCGTGGGCAAGACCG
CGATCGTCGAAGGGCTGGCCCAGCGCATCATCAACGACGAAGTGCCCGAAGGCCTGCGCGGCAAGCGCGTGCTGTCGCTG
GACATGGGCGCGCTGATTGCCGGGGCCAAGTTCCGCGGCGAATTCGAGGAGCGCCTGAAGGGCGTGCTCAACGACCTGGC
CAAGAACGAGGGCCAGATCATCCTGTTCATCGACGAACTGCACACCATGGTCGGCGCCGGCAAGGCCGATGGCGCGATGG
ATGCCGGCAACATGCTGAAGCCAGCGCTGGCACGCGGCGAGCTGCACTGCATCGGCGCCACCACGCTGGACGAATACCGC
AAGTACATCGAGAAGGATGCTGCGCTGGAGCGTCGCTTCCAGAAGGTGTTCGTGGGCGAGCCGTCGGTGGAGGACACCAT
CGCGATCCTGCGCGGCCTGAAGGAAAAGTACGCGGTGCACCACGGCGTGGAGATCACCGATCCGGCCATCGTCGCGGCTG
CGACGTTGTCCAACCGCTACATCACCGACCGCCAGCTGCCGGACAAGGCCATCGACCTGATGGACGAAGCCGCCTCGCGA
CTGCGCATGGAGATCGACTCCAAGCCGGAAGAGCTGGACCGCCTTGAGCGCCGGGTGATCCAGCTGAAGATCCAGCGCGA
GATGCTGAAGAAGGAGAAGGACGAAGCCTCGCGGCAGCGCCTGGCCGACCTGGAGAACGACATCGACGGGCTGGAGCGCG
AGTTCTCCGACCTCAATGAAATCTGGAAGTCGGAGAAGGCCGCGCTGCAGGGCGCGACCAAGATCAAGGAACAGGTCGAG
CAGGCCAAGCTGGAGCTGGAGGCCGCGCAGCGCCGCCAGGATTTCGCCAAGATGAGCGAGATCCAGTACGGGCTGCTGCC
GCAGCTGGAAAAGCAGCTGGCCGCGGCCCAGGAGGCCGAGCACAAAGACTTCAAGCTGGTGCAGGACCGCGTGACCGACG
AGGAGATTGCCGAGGTCGTATCGCGCTGGACCGGCATCCCGGTCAACAAGATGCTCGAAGGCGAGCGCGACAAGCTGTTG
CGCATGGAAGAGGTACTGCACAACCGCGTGGTCGGCCAGGAAGAAGCGATCAAGGTCGTCTCCGATGCCGTGCGCCGTTC
GCGTGCGGGCCTGTCCGATCCGAATCGCCCGGCCGGCTCGTTCCTGTTCCTCGGCCCGACCGGCGTCGGCAAGACCGAGC
TGTGCAAGTCGCTGGCCGAGTTCCTGTTCGACAGTGCCGACGCGATGATCCGCATCGACATGAGCGAGTTCATGGAGAAG
CACAGCGTCGCCCGTCTGATCGGCGCGCCTCCGGGTTACGTGGGCTACGAGGAAGGTGGCTACCTGACCGAGGCCGTGCG
TCGCCGTCCGTACTCGCTGATCCTGCTGGACGAAGTGGAGAAGGCGCATCCGGATGTGTTCAACATCCTGCTGCAGGTGC
TGGACGATGGCCGCCTGACCGATGGACAGGGCCGCACCGTGGACTTCCGCAACACCGTCATCGTGATGACCTCGAACCTG
GGCTCGCACCAGATCCAGGACATGAGCGCCGACGACAGTCCGGAGGCCTACACGCAGATGAAGGCGGCGGTGATGGGCGT
GGTACAGGCGCACTTCCGTCCGGAGTTCATCAACCGCCTGGACGACATCGTGGTGTTCCACCCGCTGGACAAGCAGCAGA
TCAAGCAGATCGCGCGCATCCAGATGCGTGGGCTTGAGAAGCGGCTGGCCGAGCGCGGATTGAAGCTGGCGGTCTCCGAT
GCGGCGTTCGACCTGCTCGGCAACGTCGGCTTCGATCCGGTCTATGGCGCGCGCCCGTTGAAGCGTGCAATCCAGTCGCA
GCTGGAGAATCCGCTGGCGCAGCAGATCCTGTCCGGTGCTTTCGTCAACGGCGATACCATCGAAGTCGGAAACGACGGCG
GCCGCCTGGTGTTCGCCAAAGCGTGA

Protein sequence :
MRMDKLTSRFQQALADAQSLAVGRDNSIIEPVHLFSALLDQQGGSTRPLLAQAGVNVPVLRERLTEALDALPKVSGQAGN
VSMGNDLGRLLNQTDKLAQQHGDAFIASEWFVLAALDDGGTLGMALRAAGADKTRLQAAIDKLRGGENVQSENAEEQRQA
LEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINDEVPEGLRGKRVLSL
DMGALIAGAKFRGEFEERLKGVLNDLAKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYR
KYIEKDAALERRFQKVFVGEPSVEDTIAILRGLKEKYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLMDEAASR
LRMEIDSKPEELDRLERRVIQLKIQREMLKKEKDEASRQRLADLENDIDGLEREFSDLNEIWKSEKAALQGATKIKEQVE
QAKLELEAAQRRQDFAKMSEIQYGLLPQLEKQLAAAQEAEHKDFKLVQDRVTDEEIAEVVSRWTGIPVNKMLEGERDKLL
RMEEVLHNRVVGQEEAIKVVSDAVRRSRAGLSDPNRPAGSFLFLGPTGVGKTELCKSLAEFLFDSADAMIRIDMSEFMEK
HSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNL
GSHQIQDMSADDSPEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKQQIKQIARIQMRGLEKRLAERGLKLAVSD
AAFDLLGNVGFDPVYGARPLKRAIQSQLENPLAQQILSGAFVNGDTIEVGNDGGRLVFAKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 7e-103 41