Gene Information

Name : gtrB (Smlt3641)
Accession : YP_001973345.1
Strain : Stenotrophomonas maltophilia K279a
Genome accession: NC_010943
Putative virulence/resistance : Virulence
Product : transmembrane glycosyl transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : 2.4.1.-
Position : 3701945 - 3702964 bp
Length : 1020 bp
Strand : -
Note : similarity:fasta; CAS0295; bcenocepacia; glycosyl transferase; length 347 aa; id=49.3%; E()=3.6e-50; 300 aa overlap; query 6-305 aa; subject 10-309 aa; similarity:fasta; BPSS2182; bpseudomallei; putative glycosyl transferase; length 353 aa; id=44.6%; E()=

DNA sequence :
ATGACCCGCGAACGGCTCACTTTCGTCATCGCCGCCTACAACGAGGCCCTGGCACTGCCGTTGCTGCATCCGCGGTTGTG
CGCGGTGCTCGACGCGCTGCCCGACATCGACGGCCACATTCTGTACGTGGACGACGGCAGCCATGACGGGACCTGGGAGG
TGATCGCCCGCCTGGCCCAATCCGACGCGCGGGTCTCCGCGCTGAAGCTGTCGCGCAATTTCGGCAAAGAAGCCGCACTG
ACCGCTGGCCTGGACCTGGTGCGCGAAGGGGCGGCGATGATCCTGGATGCCGATGGCCAGGACCCGCCGGAGATTGTGCC
GCAGTTCGTCGCGCGCTGGCGCGAGGGCCATGACAACGTCTATGGCACGCGCCTGGCGCGCGATGGCGAGGCCTGGATCA
AGCGTGCCACGGCGGCGATCTTCTACCGCGTGATGGGGCGCCTTTCGCGTACGCCGATCCCGGCCGATACCGGGGATTTC
CGCCTGCTGTCACCACGCGCGCTGAGTGCGCTGCGCGAGATGCGTGAGCGCCATCGTTTCATGAAGGGGCTTTTCAGCTG
GGTGGGTTTCAAGCGCGTGGCGGTGCCCTATCACCGCCACGCACGCGTGGCCGGCACCAGCAAGTTCAGCCTGTGGCGGC
TGTGGAACTTCGCCTTGGAAGGCATCACCGGGTTCTCGACCGTGCCCCTGCGCGCGGCGACCTACCTGGGGCTGGCAACC
GCGGCGGTGGCCTTCGTGTTCGGCATGTGGGTGATCGTCAAGGCCGCGCTGTACGGCGACCGGGTGGCGGGCTGGCCGAC
GATGATGGCGGTGATCCTGTTCCTGGGCGGGGTGCAGTTGATCGCGCTGGGCCTGATCGGTGAGTACCTGGGGCGCCTGT
ACGAAGAGTCCAAGCAGCGGCCGTTGTACCTGGTTGACGCGTGGCTAGCATCCGCCGTGGCAGACTCGGCTCTGCAACCC
ACCCTCGGAGGGCAGGCAGATGACCACGGTACGGCAACTGTTGGACGGCAAGTCTCCTGA

Protein sequence :
MTRERLTFVIAAYNEALALPLLHPRLCAVLDALPDIDGHILYVDDGSHDGTWEVIARLAQSDARVSALKLSRNFGKEAAL
TAGLDLVREGAAMILDADGQDPPEIVPQFVARWREGHDNVYGTRLARDGEAWIKRATAAIFYRVMGRLSRTPIPADTGDF
RLLSPRALSALREMRERHRFMKGLFSWVGFKRVAVPYHRHARVAGTSKFSLWRLWNFALEGITGFSTVPLRAATYLGLAT
AAVAFVFGMWVIVKAALYGDRVAGWPTMMAVILFLGGVQLIALGLIGEYLGRLYEESKQRPLYLVDAWLASAVADSALQP
TLGGQADDHGTATVGRQVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 9e-59 43
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 2e-60 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gtrB YP_001973345.1 transmembrane glycosyl transferase VFG0670 Protein 2e-59 44