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Name : serS (Smlt3092) Accession : YP_001972831.1 Strain : Stenotrophomonas maltophilia K279a Genome accession: NC_010943 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 3130891 - 3132171 bp Length : 1281 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTTGATCCAGCCCTGCTCCGCCACCAGCCCGCCGACCTCGCCGAACGCCTGCGCACCAGCCGCGGCTTCGAGCTCGA CGTGTCTGCCCTGGAGTCCCTGGAGGCTGATCGCAAGCGCATCCAGGTGCGGACCCAGGAGCTGCAGAGCCTGCGCAACA GTCGTTCCAAGGCCATCGGCCAGGCCAAGGCCAAGGGCGAGGACGTATCGGCCATCATGGCCGAGGTCGCAGCCTTCGCC GACGAGCTGAAGGCCTCGGAAGTGGCGCTGGACGAGCTGCGCGAGAAGATCGAAGCGATCTCGATGGGCATCCCGAACCT GCCGGCCGATGACGTGCCGGCCGGTGCCGACGAGAACGACAACGTCGAGCAGTCGCGCTGGGGAACCCCGCGCCAGTTCG ATTTCAAGGTGCTCGACCACGTCGAGCTGGGCGCCCGCAACGGCTGGCTGGACGGCGAGACCGCGGCCAAGCTGTCCGGT TCGCGCTTCACCGTCCTGCGCGGCCCGATCGCGCGCCTGCACCGTGCGCTGGCCCAGTTCATGGTCGACCTGCACACCGG CGAGCACGGCTATGAGGAAACCAACGTGCCGCTGCTGGTCAACGCCGATTCGCTGCGCGGCACCAGCCAGCTGCCGAAGT TCGAGGACGACCTGTTCAAGACGGCCGTGGGCGACTCCACGCGTTACCTGATCCCGACCTCGGAAGTGCCGCTGACCAAC ATCGTGCGCGACGAGATCGTGGACGCCGAACGCCTGCCGTTGCGCATGACCGCCCACTCGATGTGCTTCCGTGCCGAGGC CGGCAGCGGTGGTCGCGACGTGCGCGGCATGATCCGCCAGCACCAGTTCGAGAAGGTCGAGCTGGTCTCGATCAGCCGCC CGGAAGACAGCGATGCCGAACACCAGCGCATGACCCGCTGCGCCGAAGTGGTGCTGGAAAAGCTGGGCCTGCCGTACCGC AAGGTGCTGCTGTGCACCGGCGACATGGGCTTCTCGGCGGTGAAGACCTACGACCTGGAAGTCTGGCTGCCGTCGCAGGA GACCTACCGCGAGATCTCATCGTGCTCGAACTGTGGTGATTTCCAGGCCCGCCGCATGCAGGCCCGCTGGCGCAACCCCG CCACCGGCAAGCCGGAACTGGCGCATACCCTGAACGGCTCGGGCGTGGCGGTCGGCCGCGCGATGATCGCGGTGATGGAG AACTACCAGAACGCCGACGGCAGCATCACCGTGCCGGAAGCCCTGCGCCCGTACATGGGCGGCCTGGAAACCATCGCCTG A Protein sequence : MLDPALLRHQPADLAERLRTSRGFELDVSALESLEADRKRIQVRTQELQSLRNSRSKAIGQAKAKGEDVSAIMAEVAAFA DELKASEVALDELREKIEAISMGIPNLPADDVPAGADENDNVEQSRWGTPRQFDFKVLDHVELGARNGWLDGETAAKLSG SRFTVLRGPIARLHRALAQFMVDLHTGEHGYEETNVPLLVNADSLRGTSQLPKFEDDLFKTAVGDSTRYLIPTSEVPLTN IVRDEIVDAERLPLRMTAHSMCFRAEAGSGGRDVRGMIRQHQFEKVELVSISRPEDSDAEHQRMTRCAEVVLEKLGLPYR KVLLCTGDMGFSAVKTYDLEVWLPSQETYREISSCSNCGDFQARRMQARWRNPATGKPELAHTLNGSGVAVGRAMIAVME NYQNADGSITVPEALRPYMGGLETIA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-98 | 53 |
