|
Name : umuC (Smlt3039) Accession : YP_001972783.1 Strain : Stenotrophomonas maltophilia K279a Genome accession: NC_010943 Putative virulence/resistance : Unknown Product : UV protection and mutation protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0389 EC number : - Position : 3084429 - 3085718 bp Length : 1290 bp Strand : + Note : similarity:fasta; SDT2004; styphimuriumDT104; -; length 422 aa; id=40.9%; E()=2.1e-55; 428 aa overlap; query 12-429 aa; subject 3-422 aa; similarity:fasta; STY2205; styphi; UmuC protein; length 422 aa; id=40.4%; E()=2.3e-54; 428 aa overlap; query 12-429 a DNA sequence : ATGAGCGGTCAACATCAGCCGAATAGCTCCATTGCCCTGCAAGATGGAAATAATTTCTACTGCTCTGTTGAAGCAAGCTT CGATCCGAGGCTTCGCGGAAGGCCAGTATGCGTGGCAAGCAGTGGCGACGGGTGTGTGATTGCCAGGGACGCACTGAGCA AAAAGCTCGGTGTCCCGATGGGTGCGCCGATTCACCAGATCCCACCAAACGTACGCTGGCAGATCACTTTTCGCTCTGCA AATTTCGCGCTCTACGGTGACATCAGCACCAGGATTGCGTCGATCTTAAGAGACCTCTTTCCTGCAATCGAGCAATACAG CATCGATGAAAACTTCATTGACCTGGCAGGCATCCCCTCAAAGGATCACGAGCGTCTCGCAGCAGAAGCGCGAGCCCGAA TTTTGAAGTGGACCGGCATCCCATCATGCGTCGGCATTGGTCCGACGAAGACGCTCGCCAAGCTCAGCAACAAGAGGGCC AAGTCCACTGTGGAAGGTGTCGTTACGACGATGCCTGACGACCCTGCACTGCTCACTTATCCAGTTGAGGATGATTGGGG TGTGGGGAGGAAGCTCACTGCAAGGTTGGGTGCGGATGGCATCCTGACGGCAGGTGATCTGGCTGCGGCTGACGTAGACA CACTGCGCTCTCGATATGGTGTTGTGATGGCACGGACTCAGCGCGAGTTGCAAGGCATCTCGTGTGCAGATCTCGAAGAA CACGAGGCGCAACGCAAAGAAATTATGGTGTCTCGCACCTTTGGCAAAGACATCACGTCACAGACCGAGCTGATGCAAGC TATCGCCACTTTCGCACAGCGGGCCTGCGAAAAGCTTCGTTCAAGGCAGCTGCAAGCGGCGGGTGTTTGGGTCTTCATCC AGACCAATCCTTTCAAGCAAAATTTGCCGCAATACAACCCTTCAAAGTCGTTCCGGTTGCTGATGCCATCTGCGGACACG AGGGAAATTTTGATGGTTGCCCAAGGGCTGGCCAAGGCCATGTTCCGTCCAGGCTACGGCTACAAGAAAGCAGGTGTCAG CTTGCTCGATCTGATCCATATGGATGTCCAGCAGGGGGATCTGTTTGCCGGGATTGATCAGCGCAGTAAGGCCATCATGG AGGTTATGGACCGGACCAACCAGAAGTTCGGCCGGGGCTCTATGGGCTTTGCTTTCACGGCTTGGCGTCCAAGCGGAAAG ACCCTTGAAAAGCCCGCCTGGTCAGTCAAGAGGGACATGCTCTCGCCGGCTTACACCACGGATTGGAAGCAGCTCATTCG CGTGAGATAA Protein sequence : MSGQHQPNSSIALQDGNNFYCSVEASFDPRLRGRPVCVASSGDGCVIARDALSKKLGVPMGAPIHQIPPNVRWQITFRSA NFALYGDISTRIASILRDLFPAIEQYSIDENFIDLAGIPSKDHERLAAEARARILKWTGIPSCVGIGPTKTLAKLSNKRA KSTVEGVVTTMPDDPALLTYPVEDDWGVGRKLTARLGADGILTAGDLAAADVDTLRSRYGVVMARTQRELQGISCADLEE HEAQRKEIMVSRTFGKDITSQTELMQAIATFAQRACEKLRSRQLQAAGVWVFIQTNPFKQNLPQYNPSKSFRLLMPSADT REILMVAQGLAKAMFRPGYGYKKAGVSLLDLIHMDVQQGDLFAGIDQRSKAIMEVMDRTNQKFGRGSMGFAFTAWRPSGK TLEKPAWSVKRDMLSPAYTTDWKQLIRVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 1e-58 | 42 |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 6e-51 | 41 |
