Gene Information

Name : Smlt2821 (Smlt2821)
Accession : YP_001972577.1
Strain : Stenotrophomonas maltophilia K279a
Genome accession: NC_010943
Putative virulence/resistance : Virulence
Product : siderophore specific 2,3-dihydroxybenzoate-AMP ligase
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG1021
EC number : -
Position : 2855641 - 2857293 bp
Length : 1653 bp
Strand : -
Note : similarity:fasta; CAM2232; bcenocepacia; putative siderophore specific 2,3-dihydroxybenzoate-AMP ligase; length 549 aa; id=51.8%; E()=6.8e-88; 529 aa overlap; query 16-544 aa; subject 19-546 aa; similarity:fasta; BPSS0584; bpseudomallei; salicyl-AMP ligas

DNA sequence :
ATGAGTACCTCCACTGACTCTTCCCGCCTGCCACTGCAGCAGGTGTGGCCCGACACGCTGGTGGCGCGCTATCGCGAAGC
CGGTCACTGGCGTGGCGAGACCTTCCCGGGTTTCCTGCGCGAGCGTGCAGAACGCTACGCCGATGACATCGCGGTAGTCG
CCGGCGACGTACGCCTGAGCTATGCGCAGCTGTGGCATGAGGCAGGCCGCATCGGTGCGGGCCTGCTGGCGCTCGGCCTG
CAGCCTGGCGAACGGGTGCTGGTGCAGCTGGGCAATACCGCCGGGTTCATCACCACGGTCTGCGGCCTGTTCCGCGCCGG
CCTGGTGCCGGTGTATGCGTTGCCGGCGCACCGCATCACCGAGCTGGTCCACTTCGCCAGCAAGGCGGAAGCCAGTGCCT
ACATCACCACCGCACTGCACGATGGCTTCGATCATCGCGCGTTGGCAAGGGCGCTGCAGGCCGAAGTGCCGGCGGTTCGC
CATGTGGTGATCGACGGCGATGCGGCGGAGTTCATCGCGCTGGAGGCACTGCAGGGCGATCGCAGCCAGCTGCCGTCCGA
TCCGGACCCGCAGTCGGTGGCGTTCCTGCAGATATCCGGAGGCAGCACCGGGCTGTCCAAGCTGATTCCGCGTACCCACG
ACGACTACATCTACTCGTTCCGCGCCAGCAATGACCTCTGCGGCATCGACCGCGACAGCGTCTATCTGGTCGCGCTGCCG
GCCGCGCACAATTTCCCGATGAGTTCGCCGGGCTTCTTCGGCGCACTGTATGCCGGCGCCCGCGTGGTGCTCAGTCCCGG
CCCCGGTCCGGATGCGGCCTTCCCGCTGATCGCCCGCGAGCAGGTGACCTGCTGCGGGCTGGTGCCGCCGCTGGCGTTGC
TGTGGGCACAGGCCGCCGCCACCAGCAAGCATGATCTGTCCAGCCTGCAGGTACTGCAGGTAGGCGGCGCCAAACTGGTG
CCGGAAGCCGCACGACGGGTGATCGATGGCCTTGGCTGCACGCTGCAGCAGGTGTTCGGCATGGCCGAAGGCCTGGTCAA
CTACACACGGCTGGATGACCCGGAGGAACTGATCGTGGCCTGCCAGGGCAGGCCGATCAGTCCGGATGATGAAGTGCGCG
TGGTCGATGATCACGACCAGCCGGTGGCCGAAGGCGAGGTAGGGCATCTGCTCACCCGTGGGCCGTACACCATCCGCGGC
TACCACAACGACGCGGTCGCCAATGCGCGCTCGTTCACCGATGACGGCTTCTATCGTACCGGTGACCGTGTGCAGCAGCT
GCCCGGAGGCTACCTGGTGGTGCAGGGCCGCGCCGGTGACCACATCAACCGTGCCGGCGAGAAGATCTCCGCCGAAGAGA
TCGAAGATCACCTGCTGGCCCACCCCGGTGTGTTCGATGCGGCCGTGGTCTCCATTCCCGACGAGTACCTGGGCGAGCGC
AGCTGTGCCTTCGTGATTCCGCAGGGCGAACCGTTCAAGGCGCCGGCGCTGAAGTCCTGGATGCGCGGGCGCGGCCTGGC
GGCGTTCAAGGTGCCCGACCAGGTCGTGTTGGTCGACAGTTTCGATACCACCGCGGTCGGCAAGATCAGCCGCCGCGAAC
TGCGCGCGCAGTTGCGTGCGCGTCATCTGCAACAGACAGGAGGAACGCGCTGA

Protein sequence :
MSTSTDSSRLPLQQVWPDTLVARYREAGHWRGETFPGFLRERAERYADDIAVVAGDVRLSYAQLWHEAGRIGAGLLALGL
QPGERVLVQLGNTAGFITTVCGLFRAGLVPVYALPAHRITELVHFASKAEASAYITTALHDGFDHRALARALQAEVPAVR
HVVIDGDAAEFIALEALQGDRSQLPSDPDPQSVAFLQISGGSTGLSKLIPRTHDDYIYSFRASNDLCGIDRDSVYLVALP
AAHNFPMSSPGFFGALYAGARVVLSPGPGPDAAFPLIAREQVTCCGLVPPLALLWAQAAATSKHDLSSLQVLQVGGAKLV
PEAARRVIDGLGCTLQQVFGMAEGLVNYTRLDDPEELIVACQGRPISPDDEVRVVDDHDQPVAEGEVGHLLTRGPYTIRG
YHNDAVANARSFTDDGFYRTGDRVQQLPGGYLVVQGRAGDHINRAGEKISAEEIEDHLLAHPGVFDAAVVSIPDEYLGER
SCAFVIPQGEPFKAPALKSWMRGRGLAAFKVPDQVVLVDSFDTTAVGKISRRELRAQLRARHLQQTGGTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ybtE AAA93464.1 yersiniabactin 2,3-dihydoxybenzoate-AMP ligase Virulence HPI Protein 2e-99 49
irp5 YP_002346898.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 3e-99 49
ybtE NP_669710.1 salicyl-AMP ligase Virulence HPI Protein 3e-99 49
ybtE NP_993003.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 3e-99 49
ybtE YP_070120.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 3e-99 49
ybtE CAA21394.1 - Virulence HPI Protein 3e-99 49
irp5 YP_001006819.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 3e-98 48
ybtE YP_853079.1 yersiniabactin siderophore biosynthetic protein Virulence PAI IV APEC-O1 Protein 3e-99 48
irp5 CAA73130.1 Irp5 protein Virulence HPI Protein 2e-98 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Smlt2821 YP_001972577.1 siderophore specific 2,3-dihydroxybenzoate-AMP ligase VFG0168 Protein 9e-113 52
Smlt2821 YP_001972577.1 siderophore specific 2,3-dihydroxybenzoate-AMP ligase VFG1817 Protein 1e-105 48
Smlt2821 YP_001972577.1 siderophore specific 2,3-dihydroxybenzoate-AMP ligase VFG0932 Protein 2e-100 46