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Name : gspE (Smlt2741) Accession : YP_001972504.1 Strain : Stenotrophomonas maltophilia K279a Genome accession: NC_010943 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 2773140 - 2774573 bp Length : 1434 bp Strand : - Note : similarity:fasta; BAV0334; bavium; general secretion pathway protein E; length 473 aa; id=70.3%; E()=4e-111; 472 aa overlap; query 6-477 aa; subject 5-473 aa; similarity:fasta; CAL3526; bcenocepacia; general secretory pathway protein E; length 496 aa; id= DNA sequence : GTGAGCGCTTCCGCGCCGCTGCCGTACGCCTGGGTGCGCAGCCATGGCGTGATGCTGTCCGAAGTTGGCGGCGAGCCCGT GTTGCTGGGCACCGCCGACACCGCAGCGTGGGCTGTGGCCGAGCTGCGCCGCCGGCATGGCCCGCTGCCGTTCCAGGCGC TGGACGCTGCGACGTGGCAACAGCGGTTGGGTGAGCAGTACCGTGACGGCGGCGATGCCGCTGCCGTGGTGGGTGCCGCC GAAAGCGAAGTCGATCTGGACCGGCTGATGCAGGACATGCCGGAGGTCACCGATCTGCTGGATGCTCAGGACGATGCGCC GGTGATCCGCATGATCAACGCGCTGCTGGCACAGGCCGCACGCGATGGCGCCAGCGATCTGCACATCGAACCGTTCGAGA CCCATTCGGTTGTGCGCTACCGCGTGGACGGCACCCTGCGCGACATGGTGCAGCCACGGCGCGCACTGCATGCGGCGCTG GTATCACGCATCAAGATCATGGCGCACCTGGACATTGCCGAGAAGCGCCTGCCGCAGGACGGGCGCATCGCCATCCGCGT GGGCGGGCGGCCGCTGGATATCCGTGTCTCCACGGTGCCGACCGCTCATGGCGAGCGTGCTGTGCTGCGCCTGCTGGAAA AGGATGCCGGTCGCCTGCAGCTGCAGCGCCTCGGCATGGCCGATGACACGCTGGCCACGTTCACCGGGTTGATCCGTCAG CCGCACGGCATCGTGCTGGTCACCGGGCCGACCGGCAGCGGCAAGACCACGTCGCTGTACGCCGCACTGGGCCAGCTCGA CAGCAGCACCAGCAACATCCTCACTGTGGAAGACCCGGTGGAGTACGACTTCGCCGGCATCGGCCAGATCCAGGTCAACG CGCGCATCGGCATGAGCTTTGGCACCGCGCTGCGTGCGATCCTGCGCCAGGATCCGGACACCATCATGATCGGTGAGATC CGCGACCTGGAGACCGCGCAGATTGCGGTGCAGTCGTCGCTGACCGGGCATGGCGTGCTGGCCTCGCTGCACACCAACGA TGCGATCTCGGCGGTGACCCGCCTGGCTGACATGGGCGTGGAGCCCTTCCTGCTGGCCTCGTCGCTGCGCGGCGTGCTGG CGCAGCGGCTGGTGCGGCGGCTGTGCACGCAGTGCCGTCGTGCCGAGGTGGACGGCGAGGGTCGCACCGTATGGCGCGCG GTGGGCTGCGCGGCCTGCGCCAACAGCGGCTATCGGGGGCGAACCGGCATCCATGAACTGTTCGTGGTCGACGACCGCGT GCGCGCACTGATCCATGAAGGGCAGGGCGAGCCTGCGCTACGCGAGGCGGCCCGGCGGGCCGGCATGCGGACCCTGCGGC AGGACGGCCAGCGCTGGGTCGACAGCGGGGTGACCACGCTGGAAGAGATCCTGCGCGTCACCGGCGACGATTGA Protein sequence : MSASAPLPYAWVRSHGVMLSEVGGEPVLLGTADTAAWAVAELRRRHGPLPFQALDAATWQQRLGEQYRDGGDAAAVVGAA ESEVDLDRLMQDMPEVTDLLDAQDDAPVIRMINALLAQAARDGASDLHIEPFETHSVVRYRVDGTLRDMVQPRRALHAAL VSRIKIMAHLDIAEKRLPQDGRIAIRVGGRPLDIRVSTVPTAHGERAVLRLLEKDAGRLQLQRLGMADDTLATFTGLIRQ PHGIVLVTGPTGSGKTTSLYAALGQLDSSTSNILTVEDPVEYDFAGIGQIQVNARIGMSFGTALRAILRQDPDTIMIGEI RDLETAQIAVQSSLTGHGVLASLHTNDAISAVTRLADMGVEPFLLASSLRGVLAQRLVRRLCTQCRRAEVDGEGRTVWRA VGCAACANSGYRGRTGIHELFVVDDRVRALIHEGQGEPALREAARRAGMRTLRQDGQRWVDSGVTTLEEILRVTGDD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 5e-111 | 52 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-111 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_001972504.1 | general secretion pathway protein E | VFG0182 | Protein | 7e-118 | 57 |
| gspE | YP_001972504.1 | general secretion pathway protein E | VFG2048 | Protein | 1e-110 | 52 |
| gspE | YP_001972504.1 | general secretion pathway protein E | VFG1876 | Protein | 2e-119 | 49 |
| gspE | YP_001972504.1 | general secretion pathway protein E | VFG2426 | Protein | 1e-72 | 46 |
