Gene Information

Name : Smlt2489 (Smlt2489)
Accession : YP_001972267.1
Strain : Stenotrophomonas maltophilia K279a
Genome accession: NC_010943
Putative virulence/resistance : Unknown
Product : ISXac3 like element protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 2519881 - 2520732 bp
Length : 852 bp
Strand : -
Note : similarity:fasta; BPSS2148; bpseudomallei; putative IS element protein; length 286 aa; id=41.9%; E()=5.5e-40; 277 aa overlap; query 8-283 aa; subject 9-280 aa

DNA sequence :
ATGAAGCAACACGCAGATGAGTTCGGCCTCGCGGCGATGTGTCGGATGCTTGGCGTCCATCGCAGTGGCTACTACGCCTG
GCTAAAAGAGCCGGCAAGCGCTCGCGACAAGGACGATCAGCGGTTGCTCGGCCTAATCAAGCACAGCTGGCTGGAAAGCG
GCTCTGTGTATGGCCACCGCAAAGTGACCACAGATCTGCGCGAGCTTGGCGAGACGTGTAGTCGTCATCGCGTGGCACGC
TTGATGAAGAGCGAGGGGCTGCGGGCAATGGTCGGCTACGGTCGGCGACCACGCCCATTGAGCGGCCCTGTTGGATCAGT
CGCCAAGAACGTTCTGGCTCGCGGCTTCAAAGTCAGTGAGCCAAATCGCGCGTGGGTCACGGACATCACCTACATCCGCA
CGTACGACGGCTTCCTGTACTTGGCGGTAGTGCTTGATCTGTTTTCGCGTCAGGTCGTTGGATGGGCAACCCGACCAACT
CAACATACGGACCTGGTTTTGCAGGCGCTATTGGCTGCAGTGTGGCGGCGCAAGCCAAGCCCCGGGCTTCTGCTTCACTC
CGACCAGGGAACCCAGTTCACCAGCGAAGACTGGCAGAGCTTCCTGCGCGAGCACGACATCGTGTGCAGCATGAGTCGAC
GAGGAAACTGCCATGACAACGCAGCGATGGAGAGCTTCTTCCAGCTACTGAAGCGGGAGCGTATTAAGCGGAGGATCTAC
AGCAATCACGACGAGGCACGGGCCGACGTCTTCCAGTACATCGAGATGTTCTACAACCCAAAACGGCGGCACAGTTCCAA
CGACGGGCTGTCCCCGGTAGAGTTCGAGAAGCAGTACGCACTAAACGGCTGA

Protein sequence :
MKQHADEFGLAAMCRMLGVHRSGYYAWLKEPASARDKDDQRLLGLIKHSWLESGSVYGHRKVTTDLRELGETCSRHRVAR
LMKSEGLRAMVGYGRRPRPLSGPVGSVAKNVLARGFKVSEPNRAWVTDITYIRTYDGFLYLAVVLDLFSRQVVGWATRPT
QHTDLVLQALLAAVWRRKPSPGLLLHSDQGTQFTSEDWQSFLREHDIVCSMSRRGNCHDNAAMESFFQLLKRERIKRRIY
SNHDEARADVFQYIEMFYNPKRRHSSNDGLSPVEFEKQYALNG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 7e-38 44
tnpB CAB61574.1 transposase B Not tested HPI Protein 7e-38 44
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 1e-28 42
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 1e-28 42
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 3e-41 41
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 2e-28 41
unnamed AAC31485.1 L0006 Not tested LEE Protein 2e-28 41
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 3e-39 41
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 3e-39 41
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 3e-39 41
unnamed CAI43898.1 putative transposase Not tested LEE Protein 8e-29 41
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 8e-29 41
Z5089 NP_290241.1 transposase Not tested LEE Protein 2e-28 41
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 2e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Smlt2489 YP_001972267.1 ISXac3 like element protein VFG1484 Protein 8e-29 42
Smlt2489 YP_001972267.1 ISXac3 like element protein VFG0785 Protein 1e-28 41