Gene Information

Name : Smlt2413 (Smlt2413)
Accession : YP_001972200.1
Strain : Stenotrophomonas maltophilia K279a
Genome accession: NC_010943
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3464
EC number : -
Position : 2446089 - 2447429 bp
Length : 1341 bp
Strand : -
Note : similarity:fasta; BPSL1028; bpseudomallei; transposase; length 406 aa; id=23.9%; E()=2.6e-16; 355 aa overlap; query 29-371 aa; subject 38-387 aa

DNA sequence :
GTGACGGACTTTCTCCAGCTGCGAAGCCTGAAGACGCTTGAAATCCTGACCAGCGAGGACAGTTACGTCGTCAAGGCCGA
AGGCGTCAATCAGTGGGTGACCTGCCCGCTGTGCAAGACCGGATGCCTGCATGGTCACGGCTCACAGGAACAGTCGTTTC
AGGACACACCGACGCACGGCAAACCCGTCGTGATCTTCATCCAGCGCCGTCGCTATCGCTGTACAAGCTGCACCAAGACC
TTGTTTGAGCCTGTGGCGGACCTTGATGGAAAACGCCAAGCCACGGCGCGTCTGGTGCGTTATATCCGCGACCAGTCCTT
CTCCAAGACCTTTGCGGCCCTTGCCCGGGAAGTAGCCGTGGAAGAAAAGACGGTCCGCCACGTCTTCGACGATTTCATCG
AGGAGGTCGAGGCCAAGACCCAGTTCCGGACGCCGCGGGTGCTGGGTATCGACGAGCTCAAGATCATCGGCCAGTACCGG
GCCATGATCACCAACGTCGAGCGCAAGACCGTGTTCGATATCCGCCCCAGCCGGGCCAAAGCCGAGTTGATGCCCTATTT
CCGCGACCTGCGGGACAAGGACTCGGTCGAGTGGGTGGCGATGGACATGTACCACGTTTATCGGCAGGTGGTGCGCGCCA
CGCTGCCACAGGCCCGGATCGTGGTCGATCGATTCCATATCCAGCGCATGGCGAACGACGCGCTGGAGAAGCTGCGCAAG
CGCATTCGCAAGGATTTGTCCACCCGGCAGCGCCTCAAACTCAAGGACGAGCGGTTCCTGCTGCTCAAGCGGCAGCACGA
CCTGACAGGGAGAGATATGGACCGGATGCGGGAATGGTTCCAACAGTTCCCGCTCCTAAGCGAAGCCCACGCGCTCAAGG
AAGGATTTCTGTCGATCTGGGATCAGAAGACCCGCCCAGCAGCAGAAGCCGCCTGCGCGAAGTGGCAGGCCAATATTCCG
ACCGAATTGGCGGCCACGTTCAAGGACCTGACCACCGCCGTGCACAACTGGCACGACGAAATCTTCGCCTACTTCGAGCA
GCCGATTACCAATGCCTATACTGAGTCAGTCAACCGAGTGGCCAAAGACATGAACCGCATGGGCAGGGGTTACAGCTTCG
AGGTGCTTCGGGCGCGCATGCTCTACGACAAGAAGGCGCGCAAGGATGGCTCGGTTATCGAAACCGTGTTGGTCGATGAC
GACGACCCAATGACCACGGACTTCGTGTTCCAGCGGATGACCACGGCGGCAACGCGCAAGAAGAAGATCACGCGCGTGGT
CGAGTACGGCCCCTATCTCCCGACGCTGGCGCGGCTACTCGAAGAGGGGTATTTCGAATAG

Protein sequence :
MTDFLQLRSLKTLEILTSEDSYVVKAEGVNQWVTCPLCKTGCLHGHGSQEQSFQDTPTHGKPVVIFIQRRRYRCTSCTKT
LFEPVADLDGKRQATARLVRYIRDQSFSKTFAALAREVAVEEKTVRHVFDDFIEEVEAKTQFRTPRVLGIDELKIIGQYR
AMITNVERKTVFDIRPSRAKAELMPYFRDLRDKDSVEWVAMDMYHVYRQVVRATLPQARIVVDRFHIQRMANDALEKLRK
RIRKDLSTRQRLKLKDERFLLLKRQHDLTGRDMDRMREWFQQFPLLSEAHALKEGFLSIWDQKTRPAAEAACAKWQANIP
TELAATFKDLTTAVHNWHDEIFAYFEQPITNAYTESVNRVAKDMNRMGRGYSFEVLRARMLYDKKARKDGSVIETVLVDD
DDPMTTDFVFQRMTTAATRKKKITRVVEYGPYLPTLARLLEEGYFE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Pmu_03510 YP_005176249.1 transposase tnpA Not tested ICEPmu1 Protein 5e-81 44
tnpA AGK36656.1 transposase of ISL3 family Not tested AbaR26 Protein 1e-70 42
1_52 CAJ77024.1 Transposase Not tested AbaR1 Protein 8e-71 42
1_386 CAJ77097.1 Transposase Not tested AbaR1 Protein 8e-71 42
tpnA ADI24144.1 transposase Not tested AbaR1 Protein 8e-71 42
tpnA ADZ05772.1 transposase Not tested AbaR11 Protein 8e-71 42
tnpA ACN81032.1 transposase of ISL3 family Not tested AbaR5 Protein 1e-70 42
tnpA ACS32044.1 transposase of ISL3 family Not tested AbaR5 Protein 1e-70 42