Gene Information

Name : Smlt1788 (Smlt1788)
Accession : YP_001971613.1
Strain : Stenotrophomonas maltophilia K279a
Genome accession: NC_010943
Putative virulence/resistance : Virulence
Product : two-component response regulator transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 1837063 - 1837710 bp
Length : 648 bp
Strand : +
Note : similarity:fasta; SDT1955; styphimuriumDT104; invasion response-regulator; length 218 aa; id=43.8%; E()=4e-33; 210 aa overlap; query 3-210 aa; subject 2-211 aa; similarity:fasta; STY2155; styphi; invasion response-regulator; length 218 aa; id=43.8%; E()=1

DNA sequence : 
ATGACGATTCGAGTCTACCTGGTGGATGACCACGCGCTGGTCCGCACCGGTATGAAGATGATTCTGTCGGGGGAAACCGA
CATCGAGGTGGTGGGCGAAGCCGAGACCGGCGAAGACGCGCTGCGTGAAGTCCGCCAGCTGCTGCCGGATGTGGTGCTGT
GCGACCTGCACCTGCCGGGCGTGAGCGGCATGGAAGTGACCGAGCGCATCGTCCGCAGCCACCGCAATACCCGCGTGGTG
ATCGTGTCGGTACTGGAAGACGGCCCGCTACCCAAGCGCCTGCTCGAAGCCGGTGCGGCCGGTTACATCGGCAAGGGCTG
CGATGCGCAGGAACTGCTGCGTGCGGTGCGTGATGTGGCGGCCGGTCGTCGCTACCTGGGCACCAGCATCGCGCAGAATC
TGGCGCTGTCGACAGTGGAAGGCAATGGTTCGCCGTTCGACAACCTGTCGCCGCGCGAGCTTGAGGTGGCGCTGTTGCTG
ACCCAGGGCCTGCGCCAGGAAGACATCGCGCGGCGCCTGAGCCTGAGTGCGAAGACGGTGAACACGCACAAGGCGCGGTT
GTTCGAGAAGATGGGGATCCACGACAACATCGCGCTGGCGCGGATGGCCAGCCAGTACGGGTTGGTGGATCCGGCACGGC
CGCTGTAA

Protein sequence : 
MTIRVYLVDDHALVRTGMKMILSGETDIEVVGEAETGEDALREVRQLLPDVVLCDLHLPGVSGMEVTERIVRSHRNTRVV
IVSVLEDGPLPKRLLEAGAAGYIGKGCDAQELLRAVRDVAAGRRYLGTSIAQNLALSTVEGNGSPFDNLSPRELEVALLL
TQGLRQEDIARRLSLSAKTVNTHKARLFEKMGIHDNIALARMASQYGLVDPARPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 5e-42 45
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 5e-42 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Smlt1788 YP_001971613.1 two-component response regulator transcriptional regulator VFG1889 Protein 4e-42 44