Gene Information

Name : aldH (Smlt1571a)
Accession : YP_001971409.1
Strain : Stenotrophomonas maltophilia K279a
Genome accession: NC_010943
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 1634682 - 1636178 bp
Length : 1497 bp
Strand : +
Note : similarity:fasta; BB2647; bbronchiseptica; probable aldehyde dehydrogenase; length 498 aa; id=60.6%; E()=8.4e-104; 493 aa overlap; query 6-498 aa; subject 5-497 aa; similarity:fasta; BPP1569; bparapertussis; probable aldehyde dehydrogenase; length 498 aa;

DNA sequence :
ATGGCCGACTTTCCCGACCGCAGCCACTGGCAGGTGCTGGCCCAGCAGCTTTCGATGCCCGCACAGGCCTTCATTGATGG
TCGCTACACCGACGCTGCCAGCGGCGCGCGCTTCGACTGCATCAGCCCGATTGATGGGCGCGTGCTGGGGGTGGTCGCCG
ACTGCGATGCAGAGGACGTAGAGCGCGCAGTTCGGTCGGCGCGGCGTGCCTTCGATGCGGGCCACTGGTCAGAGGCCAGC
CCGGCCCATCGCAAGCGGGTGTTACTGGCCTTGGCGGCATTGGTGGAAAAGCACGCTGATGAGTTGGCCCTGCTGGAAAC
CCTGGACATGGGCAAGCCGGTGCGCGACGCACGCCGTATCGACCTGCCCGGCGTGGTGCGCTGCCTGCGCTGGACCGCCG
AAGCGGTGGACAAGCTGTACGGCGAAGTCGCACCGACTGGCCCACACGAGCTGGGCCTGGTCACGCGCGAGCCAGCCGGC
GTGGTCGCAGCGATCGTGCCATGGAACTTTCCGTTGCTGATGGCCTGCTGGAAGATCGCGCCTGCGCTGGCCATGGGCAA
TTCGGTGGTGCTCAAGCCTTCCGAGCGGTCGCCCTTGAGTGCGTTGCGATTGGCCGCGCTGGCCGCTGAGGCGGGCCTGC
CGGACGGCGTGCTGAACGTACTGCCAGGCCACGGTACGCGCGTCGGTGAACCGTTGGCGCTGCACATGGATGTGGACGTG
CTGGCCTTCACCGGTTCCACCGCCACCGGCGCGAAGCTGCTGGAGCATGCGGGACGGTCCAACCTCAAGCGGGTCTGGCT
GGAATGCGGTGGCAAAAGCCCGCACCTGGTGTTCGCCGACGCACCGGACCTGGACGTAGCAGCCAAGGCCGTGGCGCAGG
GCATCTTCTTCAACCAGGGCGAAGTCTGCACCGCCGGCTCGCGGCTGCTGGTGCAGCGCTCGATCCGTGAGGACTTCGTG
CACCAGGTGATTGCCTACGGCCAGCATATGCAGCCGCAGCATCCACTGGAGGCCGATGCACCGATGGGCGCGTTGGTCGA
TGCCGCGCACGTGGACAAGGTGCTGGCCGATATCGCACGGGCCGAAGGCGAGGGCGCCCGCCTGCTGCTCGGCGGCCATC
GGGCCGAGGTGGAGGCCGGCGGCTGCTATGTGCAGCCCACGGTGTTCGACCAGGTGCGTCCGGACCACGCGTTGGCACGC
GAGGAGGTGTTCGGCCCGGTGCTGGCGGTGCTTGGTTTCGAGGATGAAGCGGAGGCAGTGCGCGTGGCCAATGACAGCCG
CTATGGGTTGGCGGCGGGCCTGTGGACACGCGACCTCGGCCGCGCCCATCGCGTCGCACGCCAGCTGCGCGCCGGCAGCG
TGTGGGTGAACGGCTGGGATGGTGGCGACATGACCGCACCGTTCGGTGGCTACAAGCAGTCCGGCAATGGGCGCGACAAG
TCACTGCATGCGTTCGACAAGTACAGCGAGATCAAGGCCACCTGGATCCAGCTGTAA

Protein sequence :
MADFPDRSHWQVLAQQLSMPAQAFIDGRYTDAASGARFDCISPIDGRVLGVVADCDAEDVERAVRSARRAFDAGHWSEAS
PAHRKRVLLALAALVEKHADELALLETLDMGKPVRDARRIDLPGVVRCLRWTAEAVDKLYGEVAPTGPHELGLVTREPAG
VVAAIVPWNFPLLMACWKIAPALAMGNSVVLKPSERSPLSALRLAALAAEAGLPDGVLNVLPGHGTRVGEPLALHMDVDV
LAFTGSTATGAKLLEHAGRSNLKRVWLECGGKSPHLVFADAPDLDVAAKAVAQGIFFNQGEVCTAGSRLLVQRSIREDFV
HQVIAYGQHMQPQHPLEADAPMGALVDAAHVDKVLADIARAEGEGARLLLGGHRAEVEAGGCYVQPTVFDQVRPDHALAR
EEVFGPVLAVLGFEDEAEAVRVANDSRYGLAAGLWTRDLGRAHRVARQLRAGSVWVNGWDGGDMTAPFGGYKQSGNGRDK
SLHAFDKYSEIKATWIQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-105 55
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 7e-59 42
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 8e-60 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 8e-60 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 8e-60 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-59 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aldH YP_001971409.1 aldehyde dehydrogenase VFG0082 Protein 3e-59 42