Gene Information

Name : CYS1 (Smlt0617)
Accession : YP_001970515.1
Strain : Stenotrophomonas maltophilia K279a
Genome accession: NC_010943
Putative virulence/resistance : Resistance
Product : cystathionine beta/gamma-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 630100 - 631284 bp
Length : 1185 bp
Strand : +
Note : similarity:fasta; with=UniProt:P0A4K3 (EMBL:AF131880;); Lactococcus lactis subsp. cremoris (Streptococcus cremoris).; metC; Cystathionine beta-lyase (EC 4.4.1.8) (CBL) (Beta-cystathionase) (Cysteine lyase).; length=380; id 54.233%; ungapped id 54.667%; E(

DNA sequence :
ATGTCCAACGCTACTTCCCAGGATCGCGCCCTGGCCCTGGCCACGCTGGCCATCCACGGCGGCCAATCGCCCGACCCCAG
CACCGGCGCGGTGATGCCGCCGATCTACGCCACCTCGACCTATGCGCAGTCCAGCCCGGGCGAGCACCAGGGCTTCGAGT
ACTCGCGTACCCACAACCCGACCCGCTTCGCCTATGAGCGTTGCGTGGCGTCGCTGGAAGGCGGTACACGTGGCTTTGCC
TTCGCCTCGGGCATGGCGGCCAGCTCGACCGTGATCGAACTATTGGACGCCGGCAGCCACGTGGTGGCGATGGACGATAT
CTATGGCGGCAGCTTCCGCCTGTTCGAGCGCGTGCGTCGCCGCACCGCCGGACTGGATTTCAGCTTCGTCGACCTGACCG
ACCTGGCTGCGTTCGAGGCAGCCATCACGCCAAAGACGAAGATGGTCTGGATCGAGACCCCGACCAATCCGATGCTGAAG
ATCGTAGACATCGCCGCGGTGGCCGCCATCGCCAAGCGCCATGGCCTGATCGTGGTGGTCGACAACACCTTCGCCTCGCC
GATGCTGCAGCGCCCGCTGGAACTGGGCGCGGACCTGGTCCTGCATTCGGCCACCAAGTACCTCAACGGCCACTCGGACA
TGGTCGGCGGCATGGTGGTGGTGGGCGACAACGCCGAGCTGGCCGAGCAGATGGCTTTCCTGCAGAACTCGGTGGGTGGT
GTGCAGGGCCCGTTCGACAGCTTCCTGGCTCTGCGCGGCCTGAAGACCCTGCCGCTGCGCATGAAGGCGCATTGCGCCAA
CGCGCTGGCCCTGGCCCAGTGGCTGGACAAGCACCCGGCGGTGGAGAAGGTGATCTACCCGGGCCTGCCGTCGCACCCGC
AGCATGAGCTGGCGGGCAGGCAGATGGCCGGCTACGGCGGCATCGTCTCGATCGTGCTCAAGGGCGGTTTCGAGGCGGCC
AAGCGCTTCTGCGAGAAGACCGAGCTGTTCACCTTGGCCGAATCGCTGGGTGGTGTGGAGAGCCTGGTGAACCATCCGGC
GGTGATGACGCATGCCTCGATCCCGGTCGCGCGGCGGGAACAGCTGGGGATCAGTGATGCGCTGGTGCGGCTGAGCGTGG
GTGTGGAGGATCTGGGGGATCTGCAGGTGGATCTGGAGAGGGCGCTGGCGGGTACTGCTGCGTGA

Protein sequence :
MSNATSQDRALALATLAIHGGQSPDPSTGAVMPPIYATSTYAQSSPGEHQGFEYSRTHNPTRFAYERCVASLEGGTRGFA
FASGMAASSTVIELLDAGSHVVAMDDIYGGSFRLFERVRRRTAGLDFSFVDLTDLAAFEAAITPKTKMVWIETPTNPMLK
IVDIAAVAAIAKRHGLIVVVDNTFASPMLQRPLELGADLVLHSATKYLNGHSDMVGGMVVVGDNAELAEQMAFLQNSVGG
VQGPFDSFLALRGLKTLPLRMKAHCANALALAQWLDKHPAVEKVIYPGLPSHPQHELAGRQMAGYGGIVSIVLKGGFEAA
KRFCEKTELFTLAESLGGVESLVNHPAVMTHASIPVARREQLGISDALVRLSVGVEDLGDLQVDLERALAGTAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 8e-73 52
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-71 52
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 2e-48 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CYS1 YP_001970515.1 cystathionine beta/gamma-lyase BAC0207 Protein 5e-60 47