Gene Information

Name : APP7_1821 (APP7_1821)
Accession : YP_001969615.1
Strain : Actinobacillus pleuropneumoniae AP76
Genome accession: NC_010939
Putative virulence/resistance : Resistance
Product : transposon Tn10 tetC protein
Function : -
COG functional category : K : Transcription
COG ID : COG1309
EC number : -
Position : 2029006 - 2029674 bp
Length : 669 bp
Strand : +
Note : -

DNA sequence : 
ATGTTCTTAAGATTGTCACGACCACATCATCATGATACCATAAACATACTGACGGTATGTTATTTTAAATCTATCATGGA
AAATAAAAATCATCAACAAGAAAATTTTAAGAGTACCTATCAATCACTGGTTAACTCAGCACGAATATTGTTTGTTGAAA
AAGGCTATCAAGCTGTTTCAATAGATGAGATCTCGGGAAAAGCGTTGGTGACCAAAGGTGCCTTTTATCATCACTTTAAA
AATAAAAAACAATTACTCAGTGCCTGTTATAAGCAGCAATTAATTATGATTGATGCCTACATCACAACAAAAACTGATTT
AACAAATGGTTGGTCTGCCTTAGAAAGTATATTTGAACATTATCTTGATTATATTATTGATAATAATAAAAACCTTATCC
CTATCCAAGAAGTGATGCCTATCATTGGTTGGAATGAACTTGAAAAAATTAGCCTTGAATACATTACTGGTAAGGTAAAC
GCCATTGTCAGCAAATTGATCCAAGAGAACCAACTTAAAGCTTATGATGATGATGTGCTTAAAAACTTACTCAATGGCTG
GTTTATGCATATCGCAATACATGCGAAAAACCTAAAAGAGCTTGCCGATAAAAAAGGCCAATTTATTGCTATTTACCGCG
GCTTTTTATTGAGCTTGAAAGATAAATAA

Protein sequence : 
MFLRLSRPHHHDTINILTVCYFKSIMENKNHQQENFKSTYQSLVNSARILFVEKGYQAVSIDEISGKALVTKGAFYHHFK
NKKQLLSACYKQQLIMIDAYITTKTDLTNGWSALESIFEHYLDYIIDNNKNLIPIQEVMPIIGWNELEKISLEYITGKVN
AIVSKLIQENQLKAYDDDVLKNLLNGWFMHIAIHAKNLKELADKKGQFIAIYRGFLLSLKDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetC AAL08446.1 putative transcriptional regulator TetC Not tested SRL Protein 3e-87 100
tetC AEA34666.1 tetracycline resistance protein C Not tested Not named Protein 3e-87 100

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
APP7_1821 YP_001969615.1 transposon Tn10 tetC protein NC_010558.1.6275977. Protein 4e-101 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
APP7_1821 YP_001969615.1 transposon Tn10 tetC protein VFG1037 Protein 2e-87 100