Gene Information

Name : APP7_1646 (APP7_1646)
Accession : YP_001969440.1
Strain : Actinobacillus pleuropneumoniae AP76
Genome accession: NC_010939
Putative virulence/resistance : Virulence
Product : capsule polysaccharide export inner-membrane protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1682
EC number : -
Position : 1838387 - 1839184 bp
Length : 798 bp
Strand : +
Note : -

DNA sequence : 
ATGCAATACGGTGATCAAACAACTTTCCGCCAATCTCTCGCCATTCAAGGGAGAGTAATCGGTGCATTACTCATGCGGGA
AATTATTACGCGTTACGGACGAAAAAATTTGGGTTTTTTATGGCTGTTTGTTGAGCCGCTATTACTCACTTTATTTATCG
TTTTGATGTGGAAATTTATCCGAGCGGATCGCGTTTCCGATTTAAATATTATTGCTTTTGTGATTACCGGTTATCCAATG
GCAATGATGTGGCGTAATGCTTCAAATAGAACTATCGGAGCAATATCAGGAAATTTGAGTCTTCTTTATCATCGTAACGT
ACGTGTATTGGATACTTTACTCGCTCGAGTCCTACTGGAAGTAGCAGGCGCAACAATTGCCCAAATCATTATTATGGCAT
TATTAATATTATTGGGTTGGATTGATATGCCGAAAGATACGTTCTATATGATAATAGCATGGGTATTAATGGCATTCTTT
GCTTTAGGGCTCGGCTTGATCATTTGCTCCATTGCACAAAAATTTGAAGCATTTGGCAAAATCTGGGGAACATTAAGCTT
TGTTCTTTTACCTCTTTCAGGCGCATTTTTCTTTGTGCATGCGCTACCAAGCCAAGCTCAACAATATGCAACCTTAATAC
CGATGATTCACGGCACGGAAATGTTTCGTCACGGTTATTTTGGCGACAGTGTTATCACATATGAAAGTATAAGTTATCTC
GTCATATGTGATGTAGCCATGTTACTTTTTGGGCTCATTATGGTAAAAAACTTCAGTAAAGGAATCGAACCGCAATGA

Protein sequence : 
MQYGDQTTFRQSLAIQGRVIGALLMREIITRYGRKNLGFLWLFVEPLLLTLFIVLMWKFIRADRVSDLNIIAFVITGYPM
AMMWRNASNRTIGAISGNLSLLYHRNVRVLDTLLARVLLEVAGATIAQIIIMALLILLGWIDMPKDTFYMIIAWVLMAFF
ALGLGLIICSIAQKFEAFGKIWGTLSFVLLPLSGAFFFVHALPSQAQQYATLIPMIHGTEMFRHGYFGDSVITYESISYL
VICDVAMLLFGLIMVKNFSKGIEPQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrC NP_273137.1 capsule polysaccharide export inner-membrane protein Not tested IHT-A Protein 7e-89 74

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
APP7_1646 YP_001969440.1 capsule polysaccharide export inner-membrane protein VFG0685 Protein 9e-91 78
APP7_1646 YP_001969440.1 capsule polysaccharide export inner-membrane protein VFG0697 Protein 9e-91 78
APP7_1646 YP_001969440.1 capsule polysaccharide export inner-membrane protein VFG0257 Protein 3e-89 74
APP7_1646 YP_001969440.1 capsule polysaccharide export inner-membrane protein VFG2564 Protein 5e-48 44