Gene Information

Name : APP7_1644 (APP7_1644)
Accession : YP_001969438.1
Strain : Actinobacillus pleuropneumoniae AP76
Genome accession: NC_010939
Putative virulence/resistance : Virulence
Product : capsule polysaccharide export protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1596
EC number : -
Position : 1836017 - 1837204 bp
Length : 1188 bp
Strand : +
Note : -

DNA sequence : 
ATGGAAATTAAAAAATATAATTCAATCATAGGGTTAGCTTTAACAACATTGTTCCTTTCTGCTTGCTCAAGCCTCCCAAC
TTCAGGCCCTAGCCATAGTGCGATCTTAGAGGCTAATTCACAAAGTTCGGATAAACCCTTACCGGAAGTAAATGTGGTGG
AACTGGATAACGGTTTAGTTCAACAGTTGTATCAAACTCAGCAAAGCCAACAATTTTCCGGATTTTTAGGCACAGTAGGC
AGCGCGGGCTATGCCGGTGCAGTCAATGTGGGTGATGTACTTGAAATTTCAATTTGGGAAGCGCCGCCGGCAGTGTTGTT
TGGCGGTACTTTTAGTTCCGAAGGACAAGGTAGCGGGCATTTAACGCAATTACCGGCACAAATGGTTAATCAAAACGGGA
CGGTAACCGTGCCGTTTGTGGGAAATATTCGTGTCGCAGGTAAAACACCTGAAACGATTCAGTCTCAAATTGTTGGGGCA
TTGCAGCGTAAAGCGAATCAGCCGCAAGCATTAGTCAAAATTGCGAATAATAACTCTGCTGATGTTACGGTTATTCGTCA
AGGCAATAGTATTCGTATGCCATTAACCGCTAATAATGAACGTGTATTAGATGCGGTTGCTGCAGTAGGCGGAACAACGG
AAAACATTGAAGATGTGACGGTCAAGCTAACCCGTGGTTCTGAAGTAAAAACACTCGCATTCGAAACGTTAATTTCCGAT
CCGGCACAAAATATTATGTTACGTGCCGGCGATGTTGTTTCACTGCTAAACACACCTTATAGTTTTACCGGTTTAGGTGC
GGTGGGCAATAACCAGCAAATGAAATTCTCAAGTAAAGGAATTACGCTTGCCGAAGCTATCGGTAAGATGGGGGGTCTAA
TTGATACTCGTTCGGATCCGAGAGGGGTTTTCGTATTCCGTCACGTGCCTTTTGCACAATTGAGTTTAGAACAACAAGCA
CAATGGCAAGCTAAAGGCTACGCTATAGGAATGGATGTACCAACGGTTTATCGTGTGAACTTACTTGAGCCGCAATCCAT
GTTTTTATTACAGCGTTTCCCAATGCAAGATAAAGATATTGTGTATGTTTCAAATGCGCCGTTGTCTGAGTTCCAAAAAT
TCTTGAGAATGATTTTCTCAATTACTTCGCCGGTTACCAGTACGACCAATGCCGTTCGTGCCTATTAA

Protein sequence : 
MEIKKYNSIIGLALTTLFLSACSSLPTSGPSHSAILEANSQSSDKPLPEVNVVELDNGLVQQLYQTQQSQQFSGFLGTVG
SAGYAGAVNVGDVLEISIWEAPPAVLFGGTFSSEGQGSGHLTQLPAQMVNQNGTVTVPFVGNIRVAGKTPETIQSQIVGA
LQRKANQPQALVKIANNNSADVTVIRQGNSIRMPLTANNERVLDAVAAVGGTTENIEDVTVKLTRGSEVKTLAFETLISD
PAQNIMLRAGDVVSLLNTPYSFTGLGAVGNNQQMKFSSKGITLAEAIGKMGGLIDTRSDPRGVFVFRHVPFAQLSLEQQA
QWQAKGYAIGMDVPTVYRVNLLEPQSMFLLQRFPMQDKDIVYVSNAPLSEFQKFLRMIFSITSPVTSTTNAVRAY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrA NP_273135.1 capsule polysaccharide export outer membrane protein Not tested IHT-A Protein 3e-93 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
APP7_1644 YP_001969438.1 capsule polysaccharide export protein VFG0699 Protein 2e-139 80
APP7_1644 YP_001969438.1 capsule polysaccharide export protein VFG0687 Protein 2e-139 80
APP7_1644 YP_001969438.1 capsule polysaccharide export protein VFG0255 Protein 1e-93 53