Gene Information

Name : APP7_0130 (APP7_0130)
Accession : YP_001967924.1
Strain : Actinobacillus pleuropneumoniae AP76
Genome accession: NC_010939
Putative virulence/resistance : Virulence
Product : iron transporter membrane protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 149500 - 150354 bp
Length : 855 bp
Strand : -
Note : -

DNA sequence : 
ATGCTAGAACTACTACTCGAACCCTTCCAATATAACTATATGCAAAAAGCGATTTTCGTCAGTATGGGCGTTGGTGTGGT
TTGTGCCTTTCTCTCCGCCTTTTTAATGTTAAAAGGTTGGTCTTTAATCGGTGACGCCCTTTCACATGCCGTAGTGCCGG
GCGTTGCCATCGCTTATGCGTTAAAACTCCCTTATGCTTTCGGCGCATTTTTTTCCGGTATTCTCGCCGCTCTTGCTATT
TTATGGGTAAAAAGTATTACTCGAATAAAAGAAGATGCGGTTATCGGCTTTATCTTTACCACATTTTTTGCACTAGGCAT
GTTTATTGTATCGCTTAACCCAACCTCAGTTGATGTTAATGCGATTGTAATGGGCAACATCCTCGGCATTGCAGACGAAG
ATCTATGGCAAGTTGCGATCATTATCGGGTTATCGCTGCTTGGTCTTATCTTTTTCTGGAAAGATCTACTACTGACTTTT
TTTGATGAACATCATGCGTTGTCTGTAGGGCTCTCTCCTCTTCGCTACAAAATTTTATTCTTCACCTTATTAAGTGCTTG
TGTCGTGGTCGCATTGCAAACGGTCGGCGCAATTTTAGTAATTGCAATGGTTGTTACCCCGGGCGCAACAGCATACTTAC
TGACAGACAAATTCCCTCGTTTAGTTATTATCGCCATTCTTATCGGTAGCCTCAGCAGTGGCATCGGTGCCTATCTCAGT
TACTTTTTAAACGGTGCGACCGGCGGTGTGATTGTTTGCTTACAGACCTGTATCTTTTTATTGGCTTTTTGCTTTGCGCC
TAAATACGGTTTGATTAGCCAAAAAAGTAAGCGTTTGGGGGCAATCAATGAATGA

Protein sequence : 
MLELLLEPFQYNYMQKAIFVSMGVGVVCAFLSAFLMLKGWSLIGDALSHAVVPGVAIAYALKLPYAFGAFFSGILAALAI
LWVKSITRIKEDAVIGFIFTTFFALGMFIVSLNPTSVDVNAIVMGNILGIADEDLWQVAIIIGLSLLGLIFFWKDLLLTF
FDEHHALSVGLSPLRYKILFFTLLSACVVVALQTVGAILVIAMVVTPGATAYLLTDKFPRLVIIAILIGSLSSGIGAYLS
YFLNGATGGVIVCLQTCIFLLAFCFAPKYGLISQKSKRLGAINE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 4e-61 60
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 4e-61 60
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 3e-61 60
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-61 60
sitC NP_461784.1 permease Virulence SPI-1 Protein 4e-61 60

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
APP7_0130 YP_001967924.1 iron transporter membrane protein BAC0441 Protein 1e-76 73
APP7_0130 YP_001967924.1 iron transporter membrane protein BAC0351 Protein 2e-61 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
APP7_0130 YP_001967924.1 iron transporter membrane protein VFG0527 Protein 2e-61 60