|
Name : traE (pCNB_p87) Accession : YP_001967731.1 Strain : Genome accession: NC_010935 Putative virulence/resistance : Unknown Product : DNA topoisomerase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : - Position : 83426 - 85486 bp Length : 2061 bp Strand : - Note : - DNA sequence : ATGCGACTGTTCATCGCGGAAAAACCATCCGTCGCAAAAGCCATCGCCGGCGAGCTGGGCATCACCGGCAAGGGCGACGG CTTCATCGAGTGCGGCGGCGACAAAGTGACCTGGTGCTTTGGGCACATGCTGGAGCAGGCCGACCCGGACGAGTACACGC CCGATGACGTGCCGACCGGCAAATCAGGCAAGAAGCTATGGCGCGTCGATGAGCTGCCCATCATCCCGCAGACGTGGGTT CTTCACCCGAAGGACGATGCCAAGAAGCAGCTCGCCGTGATCGGCAAGCTGCTGAAAGAAGCCAAGGAGATCGTCAACGC CGGCGACCCCGACCGTGAAGGCCAGTTGCTGGTCGATGAAGTGCTGGAGCACTTCAAGAGCAGCAAGCCGGCGCGCCGCT TTTGGGTGTCTGCCCAGGATTCGGTTTCCGTCAAGCGCGGCCTGGCCGCCTTGAAGGAAAACACCACGTACAAGGGCTGG GCCGATGCCGCACGCGGGCGGCAGCGGGCCGACTGGCTGATCGGCATGAACCTAAGTCGCGCCTACACCCTGCGGGCGCA GCGCGGCGGTTCGCGCGCCCTGCTGACCGTGGGCCGCGTGCAGACCCCGACGCTCGCGCTTGTTGTCGGCCGCGACCGCG AGATCGAGGCGTTCAAGCCGGTGCCGTACCACACCATCAAGGCCGTGGTCGAGCACGCCGGCGGCAGCTTCGCCGCCGCC TGGAAAGCGAAGGAAGATCAAGCCGGCCTGGACAGCGAAGGCCGCCTTGTTGATACCGCCGTCGCGGATGCCCTGGTGGC CGCCGTCAAGGGCCAGCCGGGCACCATCGCCACCTACAAGCAGGAAGCCAAGAAGAAGAACCAGCCGCTGGCCTTCGCGC TGTCCGACATTACCGCGCTGGCGTCCGCGCGCTACGGGTACAGCGCCGAGGACGTGCTGAACACCTGCCAGGCGCTCTAC GAGACGCACAAGCTGACCAGCTACCCGCGCACCGACTGCGCCTACCTGCCGGAGTCGCAGCACGCCGACGCGCCGCGCGT CCTGGAGGCCGTCAAGCACGTGAACCCCGAGCTGGCCGGCCTGGTCGATGCTGCCGACCCGCGCATCAAGTCCAAGACGT GGGACGACTCGAAGATCACCGCCCACCACGGCATCGTGCCGACCATGCAGAAAGGCAGCAAGGCCGGCTTGAGCGAGCGC GAGCGCAACATCTACGAGCTGATCGTCCGCGCCTACCTGGCGCAGTTCTACCCGCTGCACGAGTACATGCAAACCACGGT CGGCGTGGAGATCGCCGGCGAGAACTTCGCCGCGTCCGGCAAGGTGGTCACGCGCAACGGCTGGCGTGACGTGTTCGAGC AGGCCGACGAAGAGGACGCCAAGGAAGGCGACGACGAGAACGGCGCGCAGACCCTGCCACCGATGAAGCAAGGCGACGGT GTGACCTGCACCGAGGCCACCCGACGCGATGCGAAAACCAAGCCGCCGGCGCGCTTCACCGAGGGCACGCTGATTCGCGC GATGGAGAACATCCACAAGTTCGTGAGCGACCCGGAGCACAAGAAGATGCTGCGCGAAGGCGATGGCATCGGCACGTCCG CCACGCGCGCATCCATCATTTCCGAGCTGAAACGCCGCGAGTTCCTGGAAACCAAGGGCAAGCAGATCGTCAGCACGACG CTGGGCCGCAGCGTCATCGACGCGCTGCCCGAGGTGGTGCGAAGCCCGGTGCTGACCGCCCTTTACGAACGCATGTTGAA GGGCGTCGAGCTGGGCACGGCGGCCCTGGACGCCTTCATTACGAAGCAAGAGGCGTTCATCCGCGACCAGGTGGCGAAGG CCAACAGCGGAGCCGTGAGCATCGCCGGCGGCAAGGAAGCCACGCCGGTTTCGTCCCTGCACAAGTGCATGGCTTGCGGC AATGGCTTGTCGCGCAGGCCGGCCAAGCGCAAGGGGCAATTCTGGTGGGGATGCAGCAACTTCCCCACGTGCAAGCAGAC CTATCCCGACCTGAAAGGCCGGCCCGACTACAGCAAGGGCCGCAATGGCCCAGCCGAGTAA Protein sequence : MRLFIAEKPSVAKAIAGELGITGKGDGFIECGGDKVTWCFGHMLEQADPDEYTPDDVPTGKSGKKLWRVDELPIIPQTWV LHPKDDAKKQLAVIGKLLKEAKEIVNAGDPDREGQLLVDEVLEHFKSSKPARRFWVSAQDSVSVKRGLAALKENTTYKGW ADAARGRQRADWLIGMNLSRAYTLRAQRGGSRALLTVGRVQTPTLALVVGRDREIEAFKPVPYHTIKAVVEHAGGSFAAA WKAKEDQAGLDSEGRLVDTAVADALVAAVKGQPGTIATYKQEAKKKNQPLAFALSDITALASARYGYSAEDVLNTCQALY ETHKLTSYPRTDCAYLPESQHADAPRVLEAVKHVNPELAGLVDAADPRIKSKTWDDSKITAHHGIVPTMQKGSKAGLSER ERNIYELIVRAYLAQFYPLHEYMQTTVGVEIAGENFAASGKVVTRNGWRDVFEQADEEDAKEGDDENGAQTLPPMKQGDG VTCTEATRRDAKTKPPARFTEGTLIRAMENIHKFVSDPEHKKMLREGDGIGTSATRASIISELKRREFLETKGKQIVSTT LGRSVIDALPEVVRSPVLTALYERMLKGVELGTAALDAFITKQEAFIRDQVAKANSGAVSIAGGKEATPVSSLHKCMACG NGLSRRPAKRKGQFWWGCSNFPTCKQTYPDLKGRPDYSKGRNGPAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 2e-116 | 43 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 2e-116 | 43 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 1e-116 | 43 |
