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Name : capD (LEPBI_II0131) Accession : YP_001964531.1 Strain : Genome accession: NC_010843 Putative virulence/resistance : Virulence Product : Capsular polysaccharide biosynthesis protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : 5.1.3.2 Position : 127340 - 129316 bp Length : 1977 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 7961465; Product type f : factor DNA sequence : GTGATTTCAAACAGGTTTTTCCTCTTTTCTATTCTTCGGAACAGATTCTGTATTTACAAGGAATTTTGTTCCAAATACCC TTATTTATCAGATATGAAATCGATCCCAAGACGATACTGGGTTTTTCCTGTAGACATTCTCTTCATGTTTTTGTCCTATT TTCTCGCACACCTCGTGCGTTTTGAAAATATTGGGTTCCTCAGCAATTACCCTGATTTTTGGCTTTGCGCTACCATCGTT GTGGTCACAAGAAGTTCGGTTTTTCTATTCTCTGGAATCTACAGATCATTATGGTCTTATGCTTCCTTACACGACCTTTT AGCCATCATCAAAGCGACCATTCTTTCTTCTTTAGTCTCAACGCTTGCCCTACTATTTTACAATCGATTTTACCAACTCT CTCGTATGGTTCCCATCCTCGATACTTTGATCCTACTTGGATTTTTGTGCCTTCGAAGTTTGAGTTGGAGGATGTTACGA GAACAAATTTTCAGTTCCGATAGAACCAGAAAAGGGACACCTATTCTACTTGTTGGTGCGGGGAAACTGGGTAGCACTTT TTTAACAGAAATTAGGCGGAATGTTGACTTGGATTACCTTCCAGTTGGTTTCCTAGATGATAACGTATCCAAAAAAGGTG GCTACATCCAAGGGATTCCGATTTTAGGTTCCACGGATGAAATTGGTAAAGTTTTACTTCGATACGGTATCAAAAAAGTC ATCATGACTGTCCCACAACCTGATGGACGTGTCGTGAGTAAACTCATGAAGGAATGTGAGGGTGCTGGAGTTGATTTTAA AATATTACCTACGTTTGGTGAGTATTTGGCAGAAAAACCAAATATCACTCAGCTCCGTGAAGTACAAGTGGAAGACTTGC TCGGTAGACCAACAGTAGATTTAGAAATTGAATCCATTCGTTCTTATTTAGAAAAAAAAGTGATCCTTGTGACTGGCGCA GGTGGTTCGATTGGATCAGAGATTTGTAGACAAGTCGCCTTATTCAAACCAAGTGTTCTTGTGATATTAGATGCCGCCGA AACTCCGTTATACGAAATTGATTACGAACTTCGTAAAAAATTTTCCGAGTTTAACATCGATATTCGACCCGTAATCGCGG ACGTAAAAAATTTATCACGAATTTCTGCCGTTTTTGAAGAACATCGGCCCTCTGTTGTATTTCACTCAGCTGCATACAAA CACGTACCGATGATGGAGATCAATCCATCCGAAGCAATTCTCAATAACGTGATGGGTACCAAAAACGTAGCAGATGTTTG TAGGCTCATTGGTGTGGAACGTTTTGTTTTAATTTCGACAGACAAAGCAGTCAACCCAGTGAATGTGATGGGTGCGTCGA AACGTGCAGCCGAGATTTACTTACAACATATCTCCCAAAATTCAAGAATCAAATTCATCACAGTTCGATTTGGGAATGTA CTTGGATCCAATGGCAGTGTGATCCCAAGATTTAGAGAACAAATCAAACGAGGTGGACCAGTCACGGTGACCCACCCAGA AGTGATTCGTTATTTTATGACAATCCCTGAGGCCACTCAACTTGTGTTACAGGCAGGTAGCATGGGAGAACATGGGGAAA TCTTTTTACTTGATATGGGAGAACCTGTTCGTATCCTTTCTCTTGCTGAAGAAATGATTCGCCTTTCTGGATACACTCCT TATAAGGATATCAATATTGAATTTTCAGGTCTTAGACCCGGTGAAAAATTATACGAAGAACTTTTGTTAAACGCAGAAGG AATCAAAAAAACCCACCATCCAAAAATTCGAATCGCAGCTCCTCTAGATCATTATAATTTATTACTCTTTCAAAATAAAT TGAATCGATTGTTTTCATTAGCAAAAGCGAATAAAAACAGAGAAATTTTTGCTGCCTTAAAAGATATCATACCAGAATAC AAAGTCCACGATGAATACATCGAATGGGAAACATCACACGGTAAAAGGAATTTATGA Protein sequence : MISNRFFLFSILRNRFCIYKEFCSKYPYLSDMKSIPRRYWVFPVDILFMFLSYFLAHLVRFENIGFLSNYPDFWLCATIV VVTRSSVFLFSGIYRSLWSYASLHDLLAIIKATILSSLVSTLALLFYNRFYQLSRMVPILDTLILLGFLCLRSLSWRMLR EQIFSSDRTRKGTPILLVGAGKLGSTFLTEIRRNVDLDYLPVGFLDDNVSKKGGYIQGIPILGSTDEIGKVLLRYGIKKV IMTVPQPDGRVVSKLMKECEGAGVDFKILPTFGEYLAEKPNITQLREVQVEDLLGRPTVDLEIESIRSYLEKKVILVTGA GGSIGSEICRQVALFKPSVLVILDAAETPLYEIDYELRKKFSEFNIDIRPVIADVKNLSRISAVFEEHRPSVVFHSAAYK HVPMMEINPSEAILNNVMGTKNVADVCRLIGVERFVLISTDKAVNPVNVMGASKRAAEIYLQHISQNSRIKFITVRFGNV LGSNGSVIPRFREQIKRGGPVTVTHPEVIRYFMTIPEATQLVLQAGSMGEHGEIFLLDMGEPVRILSLAEEMIRLSGYTP YKDINIEFSGLRPGEKLYEELLLNAEGIKKTHHPKIRIAAPLDHYNLLLFQNKLNRLFSLAKANKNREIFAALKDIIPEY KVHDEYIEWETSHGKRNL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 3e-91 | 46 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 3e-93 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| capD | YP_001964531.1 | Capsular polysaccharide biosynthesis protein | VFG1300 | Protein | 3e-91 | 44 |
