|
Name : LBF_0338 (LBF_0338) Accession : YP_001961462.1 Strain : Genome accession: NC_010842 Putative virulence/resistance : Unknown Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 353503 - 355563 bp Length : 2061 bp Strand : + Note : catalyzes branch migration in Holliday junction intermediates DNA sequence : ATGTTTGATGTCACACAAAGTTTATCGAATCTCAAAGGGATTGGTCCAAAACGAAAAACTGTATTATTAGAACATGGAAT CTCTACGTATTATGAATTATTAACCTATTTTCCAAGACGATACTTGGATCGTAATTTTACAAAAGATATCATTTTAAAAC AAGGTGATGTAGTCACTTTACTTGGAAGTATTGTAGATAGTTACATTGTGCACGGAAAAAAAAGTCGGTTACTTGTTGGC TTTCGAACCTTAAACAATGAAAGGATCAATTTAGTTTTCTTTCGTGGAGTCAATTTTTTTCAAAAACTCTTTGCCATCGA TAAAAAGGTTGTGGTCTCAGGGAAATTAGAATACTTTCGCGGTTACCAAATCCTCCATCCTGAATATGAATTTTTATCCG ATGCAGATGACCCAGAAGATTCCATTCACGCTGGGCGCATCATTCCCTTATACCCTTCCACGGAAGCATTAAAAGAAGAT GGACTCGATTCCAAGGGTTTACGGAAACTCATCCACCAAGTTTTGGAAGCTGGAACAATCAGCGAAAATTTGCCATCCAA ATTCATCAAAAAACGTAAGTTACTTGGTCGTGACGAAGCCTTTCGAAACATCCACTTTCCTGACACAATGGAAACTGTCC AAATAGCTCGGAAACGGTTTGCGTATGAGGAATTTTATTACTTCCAACGTTTGCTTTTGTACAAACAAAGAGAGAGACAA AAAGTAAAACGACTGTTATGGCCACTTCCAAAATCTCCATCACGAACTAATTTAGAAAAAAATCTTCCGTTTGAACTCAC AGAAGACCAAAAATCGGCTGTCACAACCATCCTTTCTAAAACCAATTCCGATTCGCCTTCTGCATTTTTATTACAAGGGG ATGTTGGTTCTGGAAAAACCATCACGGCTCTCCTTGTTGGTTTGCATTATATTGACAACCACATCCAAGTTGTGTTTCTC GCACCAACGGAAATCCTAGCTAGACAACATTACCAAACGATTTATAAATTTATGGGAAACATGCCATTCCTTGGGATCGA ATTATTGTTAGGTGGCGAGAATAAAAAAACCAGAGCTGAAAAACTATCTAGGATCAAAACGGGAGAATCCAATATCATCA TTGGAACACATTCTTTATTACAAGAAGATGTGATCTTTTCTGATTTAGGACTCGTTGTGATCGATGAACAACATAAGTTT GGAGTGGACCAAAGGGAAACCATACGTGCCAAAGGAAAAAATCCTGATATATTGGCCATGACTGCCACACCCATCCCTCG GACACTTTGCCTCACATTGTATGGTGATTTAACTCTCGTGAATATCAAAACAAAACCAAAAGGTCGAAAACCCATTGATA CACGTTGGTACAAAGAAGACCGTAGGGCCGGTGTTTACAACTCTATCCGAAAGTATGTTAGTTCAGGTAGACAATGTTAC ATTGTGTACCCGCTTGTAGAAGAATCCGAAAAAGTGGATTTAGAATCTTGTACAGTGGCTTATGAAAATTTGAGAACAAC GGTTTTTCCTGACTTAAAGATTGGCTTATTACATGGAAAAATGAAAAGTGTCGAAAAAGAATCCGTGATGGAAAAATTCA AGTCAGGGGAAATCCAAATCCTTGTCACAACAACTGTTGTGGAAGTGGGTGTGGATGTACCCAATGCTACCATTTTAGTT GTGGAACATGCAGAACGATTTGGAATTTCCCAATTACACCAGTTACGTGGTCGTGTTGGTAGAAGTGATTTGGAAAGTTT TTGTATTCTGATGACGGGTGATTCTATCAGCGAAGAAGGTAGGGACCGTCTCGAAGCCCTTGTCGCTTCCAATGATGGAT ATTATTTGGCAGAGAAAGACCTTGCCATTCGCGGTCCTGGAGAACTCTTAGGAGTCAAACAAAGTGGATTACCTGAGTTT AAAATCGCAGATTTAGTCGTGGACAGAGAACTTTTGGATGAGGCGAAAGAAGATGCATCTTCCATCCCACTTGATGACCC AAATGAAGTATCTGAGTTAAGGATTCGATTTAGCGAAGGTAAATTTTTATTTGCGAATTAA Protein sequence : MFDVTQSLSNLKGIGPKRKTVLLEHGISTYYELLTYFPRRYLDRNFTKDIILKQGDVVTLLGSIVDSYIVHGKKSRLLVG FRTLNNERINLVFFRGVNFFQKLFAIDKKVVVSGKLEYFRGYQILHPEYEFLSDADDPEDSIHAGRIIPLYPSTEALKED GLDSKGLRKLIHQVLEAGTISENLPSKFIKKRKLLGRDEAFRNIHFPDTMETVQIARKRFAYEEFYYFQRLLLYKQRERQ KVKRLLWPLPKSPSRTNLEKNLPFELTEDQKSAVTTILSKTNSDSPSAFLLQGDVGSGKTITALLVGLHYIDNHIQVVFL APTEILARQHYQTIYKFMGNMPFLGIELLLGGENKKTRAEKLSRIKTGESNIIIGTHSLLQEDVIFSDLGLVVIDEQHKF GVDQRETIRAKGKNPDILAMTATPIPRTLCLTLYGDLTLVNIKTKPKGRKPIDTRWYKEDRRAGVYNSIRKYVSSGRQCY IVYPLVEESEKVDLESCTVAYENLRTTVFPDLKIGLLHGKMKSVEKESVMEKFKSGEIQILVTTTVVEVGVDVPNATILV VEHAERFGISQLHQLRGRVGRSDLESFCILMTGDSISEEGRDRLEALVASNDGYYLAEKDLAIRGPGELLGVKQSGLPEF KIADLVVDRELLDEAKEDASSIPLDDPNEVSELRIRFSEGKFLFAN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 1e-85 | 42 |
