|
Name : clpA-3 (LBF_2494) Accession : YP_001963559.1 Strain : Genome accession: NC_010842 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2667460 - 2670009 bp Length : 2550 bp Strand : - Note : cytoplasmic protein DNA sequence : ATGTTGGAATTCACCAAAAGAGCAAAAAGAGTCATCAACGAAATCGCCCAAGATGAGGCTAAACGTTTAGGTTCCGATTT TATCGGTCCTGAACACATTCTACTTGGGCTTCTCCGGGAGGAGGACTCTGTCGCGATTAAGATTCTCACGAATCTAAACA TCAATTTAAACGAACTCCGTAAAGAAGTGGAGAAACGTACCCGCGAGGGTTCGGGTGCTTTGTTACTCGATGTCAGCCAA GGGCAAGACAAGTACCAAAAAATGATCGAAGTTTCCAAAGAAGAGGCAAAACGCCTCAAACATAACTATGTGGGAACCGA GCACATTCTCCTCGCATTACTTCGTGATAATAATAATATAGCGGGAGGATCTTTATCTTCCTTTAGCGTAAATTATAATG TCATCAAATCGGAAATTTTACGTCTGTTAGGCGCACCTCCTTCAGGAGCTGTGGGTGGTTCCACTGGGACCCAGTCCACA GGCCAAAGCCAATCACAAACGGCAGCACCAAGACAAGAAAAAAGTAAAACTCCGATCCTTGATGAATTTGCACGAGACCT CACACAATTGGCACGTGAGAAAAAATTGGACCCAGTCATTGGGCGCTCAAAAGAAATCGAACGTGTGATCCAAATTTTAT CGAGAAAAACCAAAAACAACCCGGTTCTCGTCGGAGAATCAGGTGTTGGGAAAACGGCGATCGTGGAAGGCCTTGCGCAA GCTGTGATCGAAAAATTGGTCCCAGATTTACTTTTCGATAAACGAGTGTTATCTTTAGATTTGGCAAGCCTCATTGCAGG TACCAAATACCGTGGTGAGTTTGAAGAACGATTGAAAAAAATCATGAAAGAAATCGTCACTTCCCAAAACATCATCATCT TCATTGATGAGTTGCACACTCTGATTGGGGCTGGGGCCGCAGAAGGGGCAGTGGATGCCGCAAACATTTTAAAACCGGCA CTCGCACGTGGCGAACTCCAATGCATTGGAGCAACAACGAATAACGAATATCGTAAATACATCGAAAAAGATTCTGCATT GGAACGAAGGTTCCAAATGGTGAAGGTACTCGAACCTTCCGTTGACGATGCGGTTCTTATTTTGGATGGATTGAAAAAAG CATACGAATCCCACCATAAGGTGCGTTATTCGGAAAAAGCCATCGAACAGGCAGTCAAACTTTCACACCGTTATATCAAC GACAGGTTTTTACCAGACAAAGCAATTGATATCATCGATGAAGCAGGAGCCAAAGCAAGACTTGCCAATTGCCAACGACC AAATGAAATCAAAGAGATCGAAGAAGAGATCAAATCGTTATCTCTGAAAAAAGAAGATTTGGTTCGTAGCCAAGAGTATG AAAAAGCGGCCGCTGTTCGCGATGAAGTGAATCGTAAAAAAGGTGAATTGGAAGAAAAAACCAAACAATGGCAAGAGAGA ATGGAAGGGTATGCCGTTTCCATCGAGGAAGAAGACATCCTTTCTGTTGTCAGTCTTTGGACGGGAATTCCATTGAAAAA AATGGAACAATCCGAAAACACAAAACTTCTTAATTTGGAAGAAGACATCAAATCTCGAATTGTTGGGCAAACCGAAGCGA TTGAAAAAGTGGCACGTGCCGTCAGACGCTCTCGCACTGGTCTCAAAAGTGAAAAACGACCTACTGGATCGTTTATTTTC CTTGGACCAACTGGTGTGGGAAAAACGGAACTTGCAAAAGCCCTCGCGGAACAATTGTTCGGTTCGGAAGACAATATGCT TCGTATCGATATGTCGGAATACATGGAGCCACATGCGGTATCAAGACTGATTGGAGCTCCTCCTGGTTATGTAGGGTATG ATGATGGTGGCCAACTCACAGAATTTGTGAGAAGAAAACCATACAGTTTGGTTTTACTTGATGAGATCGAAAAAGCCCAC CATGATTTGTTTAATATCCTTTTGCAAATTATGGAAGAGGGGAATTTAACCGATACGAAAGGTCGTAAGGTCAACTTCCG AGATACCATCATCATCATGACATCCAATATTGCCGCGAAGGAAATATCCAAAGGTGGAAGATTGGGTTTTGAAGATTTTG CAGACGAAAGGGAAGCTTATAAGGCTGAACAGGCAAGAGAACAACTTAAAAAACATTTTAATCCTGAGTTTTTAAACCGT GTGGATGAAGTGGTTTACTTTGCTCCTCTCAAAAAAGAAGAAATCGTTAGCATTGTGGATATCATGTTAAAAGATTTTAA CAAACGTTTGACGGAGAAAAAAGTATTCGTGGAACTCACATTCGCTGCAAAAGAACATTTTGCTACGATTGGATACGACC AAAACTACGGAGCCCGACCACTCCGACGTGTGTTCCAAAGAGAATTGGAAGATTATATGGCGGTTCAGTCTCTCAAAGGT GTTTATGAAAACCCTACTAAAATTTTGGTAGATATGGCAGAAGGAAAACTTGTGTATTCCGAATCAGCTTGGGAAGATTA CAAAGAAGTTCCTAAAAAAGACGATGGATCTTCGCCAAACACTGAGGAAAAAGACTTAGCCCTCGTATAA Protein sequence : MLEFTKRAKRVINEIAQDEAKRLGSDFIGPEHILLGLLREEDSVAIKILTNLNINLNELRKEVEKRTREGSGALLLDVSQ GQDKYQKMIEVSKEEAKRLKHNYVGTEHILLALLRDNNNIAGGSLSSFSVNYNVIKSEILRLLGAPPSGAVGGSTGTQST GQSQSQTAAPRQEKSKTPILDEFARDLTQLAREKKLDPVIGRSKEIERVIQILSRKTKNNPVLVGESGVGKTAIVEGLAQ AVIEKLVPDLLFDKRVLSLDLASLIAGTKYRGEFEERLKKIMKEIVTSQNIIIFIDELHTLIGAGAAEGAVDAANILKPA LARGELQCIGATTNNEYRKYIEKDSALERRFQMVKVLEPSVDDAVLILDGLKKAYESHHKVRYSEKAIEQAVKLSHRYIN DRFLPDKAIDIIDEAGAKARLANCQRPNEIKEIEEEIKSLSLKKEDLVRSQEYEKAAAVRDEVNRKKGELEEKTKQWQER MEGYAVSIEEEDILSVVSLWTGIPLKKMEQSENTKLLNLEEDIKSRIVGQTEAIEKVARAVRRSRTGLKSEKRPTGSFIF LGPTGVGKTELAKALAEQLFGSEDNMLRIDMSEYMEPHAVSRLIGAPPGYVGYDDGGQLTEFVRRKPYSLVLLDEIEKAH HDLFNILLQIMEEGNLTDTKGRKVNFRDTIIIMTSNIAAKEISKGGRLGFEDFADEREAYKAEQAREQLKKHFNPEFLNR VDEVVYFAPLKKEEIVSIVDIMLKDFNKRLTEKKVFVELTFAAKEHFATIGYDQNYGARPLRRVFQRELEDYMAVQSLKG VYENPTKILVDMAEGKLVYSESAWEDYKEVPKKDDGSSPNTEEKDLALV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 8e-179 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpA-3 | YP_001963559.1 | ATP-dependent Clp protease | VFG0079 | Protein | 0.0 | 53 |
| clpA-3 | YP_001963559.1 | ATP-dependent Clp protease | VFG0080 | Protein | 8e-148 | 52 |
