Gene Information

Name : LBF_2488 (LBF_2488)
Accession : YP_001963553.1
Strain :
Genome accession: NC_010842
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system ATPase LolD
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2662193 - 2662864 bp
Length : 672 bp
Strand : -
Note : cytoplasmic protein

DNA sequence : 
ATGAGTTTTGGAATCGAAGCCGATCGTATCTTTAAATCATTTGGGGAACCACCCCAAGTGGTTTTACAAGATGTATCCTT
AAACATCAAAGAAGGGAACTTTGTCGCTCTAACCGGGAAGTCTGGATCTGGTAAATCAACGTTATTGTACATTGTCAGTG
GGCTTGACAACCCAACCAGTGGTGATGTGAAATTGAGTGGGAAATCATTACAACAAATGGATAGTAAGGAACTCCATGCA
CTACGGAATCTATCAATTGGATTTGTCTTTCAATTCCACTATTTATTACCGGAATTAACAGGATTAGAAAATATTACGAT
GCCCGCTCGGAAAACAGGAACTCATAAACAAGTGGAAGATTATGCACTTCATCTGATGGAAAGTTTTGGTGTTTCCCATT
GCAAAGACAAATTCCCAAGCCAAATGTCAGGAGGGGAAGGGCAAAGAGTTGCGATTGCCAGAGCCCTCGTCCAAAAACCA
AAGTTTTTATTTGCTGATGAACCAACAGGGAATTTGGATACAACAAACGGTGATAAGGTGATGGAAATCTTTAGGAGGAT
CAACAAAGAAGATGGTACAACCATTTTATTTGTCACGCATGACCCTGATTATGCGGCAATTGCCGAGCAGAGGATTCATA
TGATTGATGGAAAAATTGCGGAAATTTCATAA

Protein sequence : 
MSFGIEADRIFKSFGEPPQVVLQDVSLNIKEGNFVALTGKSGSGKSTLLYIVSGLDNPTSGDVKLSGKSLQQMDSKELHA
LRNLSIGFVFQFHYLLPELTGLENITMPARKTGTHKQVEDYALHLMESFGVSHCKDKFPSQMSGGEGQRVAIARALVQKP
KFLFADEPTGNLDTTNGDKVMEIFRRINKEDGTTILFVTHDPDYAAIAEQRIHMIDGKIAEIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-35 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-36 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-36 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LBF_2488 YP_001963553.1 lipoprotein releasing system ATPase LolD NC_012469.1.7686878. Protein 3e-36 42
LBF_2488 YP_001963553.1 lipoprotein releasing system ATPase LolD CP001581.1.gene598.p Protein 6e-32 41
LBF_2488 YP_001963553.1 lipoprotein releasing system ATPase LolD NC_008702.1.4606598. Protein 3e-28 41