Gene Information

Name : LBF_1171 (LBF_1171)
Accession : YP_001962272.1
Strain :
Genome accession: NC_010842
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1273732 - 1273998 bp
Length : 267 bp
Strand : +
Note : cytoplasmic protein

DNA sequence :
ATGGCAAAGAAAAGAATCGAAGAATCTAAAATATTCCAAATTTTGAAGGAAGCAGAATCGGGTATTCCGATCAAAGAATT
ATCTAGAAAGTATGGAATCACGGAACAAACCTTTTATAGATGGCGTAACAAATACAATGGACTTGAGCTAAGTGACATCA
AACAAATGAAGGAACTCGAGCGAGAGAATTCTGAATTAAAGAAGATCGTTGCAAACATGGCTCTGGAAATCCAGGCGATA
AAAAATGTACTCGGAAAAAAGTTTTAG

Protein sequence :
MAKKRIEESKIFQILKEAESGIPIKELSRKYGITEQTFYRWRNKYNGLELSDIKQMKELERENSELKKIVANMALEIQAI
KNVLGKKF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 5e-18 49
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 1e-17 47
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 7e-18 47
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 7e-18 47
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 8e-14 44
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 1e-13 44
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 1e-15 43