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Name : Cphamn1_0825 (Cphamn1_0825) Accession : YP_001959257.1 Strain : Chlorobium phaeobacteroides BS1 Genome accession: NC_010831 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 889630 - 890913 bp Length : 1284 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTTGACATCAATTATATCAGACAGAGCCCGGAAGAAGTTGCCGGAATGCTGAAAAAACGCCGACAGGAAGAGGACTG CGCGACCCTCGATGAACTGCTGGAATACGATCGGCAGCGCAGGGAACTCGTCCAGGAAACCGATGCGCTGAAAGCGCTGA GAAACAAGGTTTCGAAAGACATTGCTGTTATCAAACGAACAGGCCAGGGTTCGGCCGAAGATCTCATCCGGGAGATGAAG GAGGTTGCCGACAGGATTGCAGGCATGGACGAAACACTGGGAGAGATCGAAAAACAGATGGAATCTATCCTCCTCTCTCT TCCAAACAAGCTTCACCCTGATGTTCCGGAAGGCTATTCAGCTGAAGAAAATCATATCTGCAAGGATCCCGTAGCCTTCG ACCATGCGCTGGATTTCCCTCTGATGGACCACCTTGACCTTGGAAACAAACTGGGCATTCTGGACTTCGAAAGGGGAGCA AAAATCTCAGGCACCGGTTTCCCGGTCTACATCGGCAAAGGCGCACGCCTTGAACGCGCACTTCTGAACTTCATGCTGGA CTGCCATACTGAAAATCACGGCTATACCGAAGTCTTTCCGCCCTTTATGGTAAACGAAGACTCGCTTCGGGGTACGGGAC AGTGGCCGAAGTTCGCCGACCAGGTCTACTACATGAACGAGGATAACCTCTACGCTATACCGACCGCCGAAGTTCCGGTA ACGAACCTCCACCGGAACGAAATGCTTAAAGACGAGGAGCTTCCCATTTCCTACGCGGCATACTCCGCATGTTTCCGGAG AGAGGCAGGAAGTTATGGAAAGGACACCCGGGGCTTCCTCAGGGTACATCAGTTCAACAAGATTGAAATGGTGAAATTCA CCCGTCCCGAAGAATCGTACGACGCACTTGAAAAGATCCTGCAGAACGCAGAAGCCATTCTCAATGCCCTCAGGATTCCT TACCGGGTGCTGCTGCTCTGTAGCGGCGATATCAGCGCAGGCGCGACAAAATGTTATGATATCGAGGTGTGGTCGCCTGC TGAAAAAAAATACCTTGAAGCATCGAGCTGTTCCAACTTTGAAGATTACCAGGCACGCAGGGCAAACATCCGCTTCAAGC CTGCCGGATCTTCAAAACCGACCTACGTCCACACCCTCAACGGGTCAGGACTGGCGACATCGAGGCTGATGGTGTCGCTG CTCGAAAACTACCAGACAGCCGAAGGCACGATTGTGGTTCCTGAAGTGCTGAGAAAATATACCGGGTTCGACCTGATCGA TTAA Protein sequence : MLDINYIRQSPEEVAGMLKKRRQEEDCATLDELLEYDRQRRELVQETDALKALRNKVSKDIAVIKRTGQGSAEDLIREMK EVADRIAGMDETLGEIEKQMESILLSLPNKLHPDVPEGYSAEENHICKDPVAFDHALDFPLMDHLDLGNKLGILDFERGA KISGTGFPVYIGKGARLERALLNFMLDCHTENHGYTEVFPPFMVNEDSLRGTGQWPKFADQVYYMNEDNLYAIPTAEVPV TNLHRNEMLKDEELPISYAAYSACFRREAGSYGKDTRGFLRVHQFNKIEMVKFTRPEESYDALEKILQNAEAILNALRIP YRVLLLCSGDISAGATKCYDIEVWSPAEKKYLEASSCSNFEDYQARRANIRFKPAGSSKPTYVHTLNGSGLATSRLMVSL LENYQTAEGTIVVPEVLRKYTGFDLID |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-90 | 49 |
