Gene Information

Name : Cphamn1_0817 (Cphamn1_0817)
Accession : YP_001959249.1
Strain : Chlorobium phaeobacteroides BS1
Genome accession: NC_010831
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 881714 - 882631 bp
Length : 918 bp
Strand : -
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: plt:Plut_0590 tyrosine recombinase XerD

DNA sequence :
ATGATGATTCCGCTTTTCTCTCCCTACAAGATCCTTCTGGACAGTTTCCTGAACTACCTGACGCTGGAGAGAAATTTTTC
TTCGCATACGATAACATCCTATGCCAATGACCTCAACCGGTACCTGCTGTTCATGCAGCATAGCGAAAAACAGATTAAAG
CGGTTGTTCTTACCGATATTCAGCACTTCATTCAGGAACTTCATGAGGCGGGACTGGAATCGCGGTCCATATCAAGAAAC
ATCTCGGCCATACGTTCTTTCCACAAATTCCTCATCCGCGAGAACATTCTCGAGGAGAACGCGGCCAAAAGCCTTCACCA
GCCGAAGCCCGGCCTGCACCTGCCGACAGTTCTTTCAGTTGACGAGGTATTCAGACTTCTCGATGCGCCGCTCCTTGAAA
AACCGCCCGGAAAGTACTTCCTGAGAGATAAAGTACTTCTGGAATTACTCTACGCAACAGGCGTACGGGTCAGCGAACTC
ATCAACATCCAGCAAAGCAACTGTTATCTTGATGCCGGCTTCGCGCGTATATTCGGCAAAGGCTCAAAAGAGCGGCTTGT
CCCTGTCGGACACACGGCAATAGAGTGGATACGGCGATATCAGCAGGAACTGCGTCTGAATATGGCAAACCGGGAATCAG
GTGATTATCTTTTTCTCAACGCACGCGGAAAGCAGCTCTCCAGAATGTCGGCATGGAATATAGTGCGCCGCCTGAGCTCC
GTTGCAGGATTAACCAAAAAAATCAGTCCGCACACCCTCCGGCACACCTTCGCCACCCATCTGCTTGAAGGGGGAGCCGA
CCTGAGAGCTGTTCAGGAGATGCTGGGGCACAGCTCGATAATCGCCACACAGATCTATACCCATATAGACCGGAGCTTTA
TCAAAGAAGCTCATAAGACATTTCATCCGAGAGGATAA

Protein sequence :
MMIPLFSPYKILLDSFLNYLTLERNFSSHTITSYANDLNRYLLFMQHSEKQIKAVVLTDIQHFIQELHEAGLESRSISRN
ISAIRSFHKFLIRENILEENAAKSLHQPKPGLHLPTVLSVDEVFRLLDAPLLEKPPGKYFLRDKVLLELLYATGVRVSEL
INIQQSNCYLDAGFARIFGKGSKERLVPVGHTAIEWIRRYQQELRLNMANRESGDYLFLNARGKQLSRMSAWNIVRRLSS
VAGLTKKISPHTLRHTFATHLLEGGADLRAVQEMLGHSSIIATQIYTHIDRSFIKEAHKTFHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 3e-41 42
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 3e-41 42