Gene Information

Name : Cphamn1_0717 (Cphamn1_0717)
Accession : YP_001959154.1
Strain : Chlorobium phaeobacteroides BS1
Genome accession: NC_010831
Putative virulence/resistance : Unknown
Product : type III restriction protein res subunit
Function : -
COG functional category : S : Function unknown
COG ID : COG4951
EC number : -
Position : 759880 - 762264 bp
Length : 2385 bp
Strand : +
Note : PFAM: DNA primase small subunit; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: dde:Dde_2493 DEAD/DEAH box helicase-like

DNA sequence :
ATGAAAAACAGCGGAGACAAAAGCGATTATGAACAGTTGCATGATGAATTGCGGCAATTGCAAAAAGAAAATGCCTGGCT
CAAATCTTTGCTGGAAGAACATGGCATACCTTTTAATGTGCGCGATCCGAAACCGGAAAATGCCTGTGAAACAAAGGAAG
AGGATCTTCAACAATTAACATTACAGAAGAAGGTACAACTGTTTCGGGATCTGTTCAGAGGACGTAATGACGTTTTTCCG
ATACGGTGGGAATCCGCGAAAGGCAAGTCGGGATACTCTCCTGCATGCGGCAATGAGTGGAGGAGAGGGATTTGTCAAAA
ACCGAGGGTAAAATGTAGTGAATGTCCTCATCGAAAGCTTTTACCTCTTACAGATCAGGTTATTTACAATCATCTTGCCG
GTCGCCATATCATAGGAGTCTATCCTCTTTGCAAAAATGATACCTGTTATTTTCTCGTTATTGATTTTGATGACGCAGAG
TGGCGTGATGATGCTCAAGCATTCATGGAGACATCTGGAAGCTTGACCATTCCAGCTTCTTTTGAGATTTCCCGTTCAGG
AAACGGTGCTCATATCTGGATTTTTTTTGCTGATGCAATTCCTGCACGTGATGCCAGGCAGCTTGGGGCAGCACTGATAA
GTCGTACTTGCGAGCGTACGCGTCAACTTTCCATGTCGAGTTATGACAGGCTGTTTCCAAGCCAGGATACTGTGCCGAAA
GGTGGTTTTGGTAATTTGATCGCATTACCTTTGCAGAAGCCTGCGAGAGATAAAGGCTTTTCTGTCTTTGTCGATGATAC
CCTTCAACCATACCCGGATCAATGGTCCTATCTTGCATCAGTTAAAAAACTTCTCAAAAGAGATGTTGAACATGCTGTGG
AGAGTCTTACCGGTGGTCGTCATCCCCTTGATGTAGCATTTATCACTGAAGAAGACGAGCTTGAACCATGGAAACGTTCA
GTCTCTGTTTCAGAATGTATTCAAGGGCCTTTGCCGACGTCGCTGACCCTGGTTCTGGCCAATCAGATATTCATTGAAAA
AGAAAAGCTTTCACAGCCGTTGCTCAATCGGTGTATCCGTCTCGCAGCGTTTCAGAATCCTGAATTTTACAAAGCCCAGG
CTATGCGCCTGCCCGTATGGGACAAACCTCGCATTATTGGCTGTGCCGAGAATTACCCAAAGCATATAGGCCTGCCACGA
GGTTGTTTTGAAGCCTTGCAGAGACTTTTAAAGCAGAACGCCATCAAGACAAATGTTGTGGATGAGCGGGTTGCCGGATC
TACGATTAATGTTGTTTTTAACGGTACATTACGGGCAGATCAAGTGAAGGCTGTTCGGACGATGGTACAGCATGATGAAG
GGATTTTGTGTGCCCCTACTGCATTTGGTAAAACGGTTGTGGCATCCGCGATTATTGCGCGTCGCAAGAAGAGTACTCTC
ATTCTCGTCCACCGTACCGAACTCCTGCGGCAATGGCAGGAACGTTTGCATACATTTCTTGATTTAGGCGATGTTGTTTT
CGGCAGTATTGGCGGAGGAAAGAAAAAACTTTCCGGGCAGATCGATATTGGTCTCATTCAGTCGTTGTCCCGCCAGCCTG
ACCTTGGAGAACTACTCGACAGGTATGGACAGATTATCATTGATGAATGTCATCATCTTTCAGCATTTACCTTTGAATCC
ATTCTCAAAGAAGCCAAGTCGAAATATATACTCGGACTTACGGCAACGCCGATAAGACGGGACGGTCACCAGCCAATACT
GTTTCTGCGATGTGGCCCTGTACGATACCGGGCAATGCATTCAGAAAGCGCTCCTGTTCATCTGGAGGTATTACCTCTAA
GCAGGTATGTTTCCGGAATTCCGGAAGAGGGCGGCATTCAGGAAATTTTTCGCGCATTGATCACTGATGAAGAAAGAAAC
CGATTGATTATTGAGGATATCAAAAGCGCATATGATCAGCGTCGAAAGGTGCTTGTGTTAACGGAAAGAACTGAACATCT
TGAACTGCTCTTAGCTCATTTGGGAGATGGCATCGATAACCTTTTTGTGCTTCATGGTCGCATATCCAGGAAAAATCGGT
TGGCTACACTTGCCAGGCTTCAGGAATTACTCGATTCAGAGCCAAGGATTATTCTCGCTACAGGTCGGCTGATAGGCGAA
GGATTTGACCATCCGCCACTTGATACTTTGGTGCTTGCCATGCCGATTTCGTGGAAAGGAACGCTTCAGCAGTATGCAGG
ACGATTACATCGGGAGCATACGGCAAAAGGTGATGTGCGCATTTATGATTACGTTGAGCAAAATCATTCACAGCTTGCTC
GGATGTGGGAAAAGCGTCAGAGAGGATATCGTGCCATGGGGTACCGGGTAAGCATGAGAACGTGA

Protein sequence :
MKNSGDKSDYEQLHDELRQLQKENAWLKSLLEEHGIPFNVRDPKPENACETKEEDLQQLTLQKKVQLFRDLFRGRNDVFP
IRWESAKGKSGYSPACGNEWRRGICQKPRVKCSECPHRKLLPLTDQVIYNHLAGRHIIGVYPLCKNDTCYFLVIDFDDAE
WRDDAQAFMETSGSLTIPASFEISRSGNGAHIWIFFADAIPARDARQLGAALISRTCERTRQLSMSSYDRLFPSQDTVPK
GGFGNLIALPLQKPARDKGFSVFVDDTLQPYPDQWSYLASVKKLLKRDVEHAVESLTGGRHPLDVAFITEEDELEPWKRS
VSVSECIQGPLPTSLTLVLANQIFIEKEKLSQPLLNRCIRLAAFQNPEFYKAQAMRLPVWDKPRIIGCAENYPKHIGLPR
GCFEALQRLLKQNAIKTNVVDERVAGSTINVVFNGTLRADQVKAVRTMVQHDEGILCAPTAFGKTVVASAIIARRKKSTL
ILVHRTELLRQWQERLHTFLDLGDVVFGSIGGGKKKLSGQIDIGLIQSLSRQPDLGELLDRYGQIIIDECHHLSAFTFES
ILKEAKSKYILGLTATPIRRDGHQPILFLRCGPVRYRAMHSESAPVHLEVLPLSRYVSGIPEEGGIQEIFRALITDEERN
RLIIEDIKSAYDQRRKVLVLTERTEHLELLLAHLGDGIDNLFVLHGRISRKNRLATLARLQELLDSEPRIILATGRLIGE
GFDHPPLDTLVLAMPISWKGTLQQYAGRLHREHTAKGDVRIYDYVEQNHSQLARMWEKRQRGYRAMGYRVSMRT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1129 NP_286664.1 helicase Not tested TAI Protein 0.0 57
Z1568 NP_287072.1 helicase Not tested TAI Protein 0.0 57