Gene Information

Name : Cphamn1_0461 (Cphamn1_0461)
Accession : YP_001958906.1
Strain : Chlorobium phaeobacteroides BS1
Genome accession: NC_010831
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 483434 - 484117 bp
Length : 684 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cch:Cag_0264 ATPase

DNA sequence : 
ATGAGTACAACCATTTTAAAACTTGTTGCTGTCCGAAAGGAACTTGAGCTCTCCCGTGATATCCGGCAAACCATTATTCC
CGGTCTTTCTCTTGAGGTCGAGGAAGGTGAATTTATCTCCATCACAGGACCTTCCGGTTCCGGGAAATCAACCCTTCTGT
ATATCATGGGAGGTCTTGACAAGCCTACATTCGGAGAGGTCTGGCTGGATGGAGTGAATATTTCAGACAAGAACGAGAAG
GAGATGTCAAAGATCCGCAATGAAAAAATCGGTTTTATCTACCAGTTTCATTTTCTGCTTCCGGAGTTCACGGCCGTTGA
AAATGTCAGTATGCCGATGATGATTAACAGTACCAGGACAAAAGCGGAAATACGACAGAGAGCTCAAATGCTGCTTGACA
AGGTTGGCTTGAGCGACCGTTATGATTACCGGCCAAGCCAGCTTTCCGGAGGTCAGCAGCAGCGGGTTGCCGTTGCACGC
TCTCTTGCCAATGAACCAAAGCTTGTTCTCGGGGATGAGCCGACCGGGAATCTGGACTCAAAATCGGGCAATCAGGTTTA
CGAGCTTTTTGAACAGCTCAACCAGGAGTTTAACCAGACGGTCATCTTTGTCACGCATGATGAGGAATTCGCCCGCAGAG
CGAAGCGGCGCATACATCTTGTGGATGGAAAAATTGATAAGTAG

Protein sequence : 
MSTTILKLVAVRKELELSRDIRQTIIPGLSLEVEEGEFISITGPSGSGKSTLLYIMGGLDKPTFGEVWLDGVNISDKNEK
EMSKIRNEKIGFIYQFHFLLPEFTAVENVSMPMMINSTRTKAEIRQRAQMLLDKVGLSDRYDYRPSQLSGGQQQRVAVAR
SLANEPKLVLGDEPTGNLDSKSGNQVYELFEQLNQEFNQTVIFVTHDEEFARRAKRRIHLVDGKIDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 7e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cphamn1_0461 YP_001958906.1 ABC transporter-like protein NC_012469.1.7686878. Protein 3e-41 49
Cphamn1_0461 YP_001958906.1 ABC transporter-like protein NC_008702.1.4606598. Protein 7e-35 46
Cphamn1_0461 YP_001958906.1 ABC transporter-like protein CP001581.1.gene598.p Protein 1e-33 42
Cphamn1_0461 YP_001958906.1 ABC transporter-like protein NC_012469.1.7685735. Protein 8e-34 41
Cphamn1_0461 YP_001958906.1 ABC transporter-like protein CP001581.1.gene798.p Protein 2e-31 41