Gene Information

Name : Cphamn1_0438 (Cphamn1_0438)
Accession : YP_001958883.1
Strain : Chlorobium phaeobacteroides BS1
Genome accession: NC_010831
Putative virulence/resistance : Virulence
Product : KpsF/GutQ family protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : 5.3.1.13
Position : 464905 - 465885 bp
Length : 981 bp
Strand : -
Note : KEGG: pvi:Cvib_1528 KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS)

DNA sequence :
ATGGCATTATCCCTCGACAGACAGGGCATTCTGGCTACAGGAAAAAGTATTATTCTCAAGGAAGCTGCTTCGCTTTCGCG
TATTGCCGGACTGCTCGACCGGAATTTTCATGCCTCCGTTGAACTGCTTTGCGCATGCAGGGGAAAAGCCATTATCTCCG
GAATGGGAAAATCGGGCATTATCGGCCAGAAAATTGCCGCCACCCTTTCCTCCACTGGAACGACAGCCCTTTTCATGCAT
CCTGCCGATGCCGCCCATGGCGACCTGGGTGTTGTTTCTGAAGATGATGTAGTCATTTGCCTCTCCAAAAGCGGTATGAC
TGAAGAACTCAACTTTATCCTTCCTGCGTTGAGGAAAATCGGGGTTTCAATTATAGCATTTACCGGAAACAAACGTTCAT
ATCTTGCTGAAAATGCCGACATCGTACTTGACGTGAGCGTTGAAGAGGAGGCCTGCCCTTTCGATCTCGCACCGACGACA
TCCACCACCGCCATGCTCGCCATGGGTGACGCTCTGGCTATCTGCCTGATGCAGGAAAAGCAGTTCACACATCGGGATTT
TGCCGTCACCCATCCAAAAGGATCACTTGGCAGACGACTCACCATGAAAGTCTCTGATATCATGGCTACCGGAGAAGCCC
TTCCGCTTGTAGAGGAAACCGTACCGCTCACCGACCTTATTCTTGAAATGACATCCAAGCGGTTTGGCATGAGCGGCATT
GTCGATCATTCAGGCAAACTTTCGGGAATATTTACCGACGGTGATCTTCGCAGGATCATTCAATGCAGAAGTGATATTCT
TTCGCTGCAGGCAAAAGATGTCATGACGAAAGGGCCGAAAACCGTCTCTGCAGATACCATGGCCGAGGAATGCCTGAAAA
TTCTTGAGTCGCACAGAATAACCCAGTTGCTGGTCTGCGAGGACGATAACCGCCCGGTAGGCCTGATTCATATCCATGAC
CTCATTTCACTGGGACTGTGA

Protein sequence :
MALSLDRQGILATGKSIILKEAASLSRIAGLLDRNFHASVELLCACRGKAIISGMGKSGIIGQKIAATLSSTGTTALFMH
PADAAHGDLGVVSEDDVVICLSKSGMTEELNFILPALRKIGVSIIAFTGNKRSYLAENADIVLDVSVEEEACPFDLAPTT
STTAMLAMGDALAICLMQEKQFTHRDFAVTHPKGSLGRRLTMKVSDIMATGEALPLVEETVPLTDLILEMTSKRFGMSGI
VDHSGKLSGIFTDGDLRRIIQCRSDILSLQAKDVMTKGPKTVSADTMAEECLKILESHRITQLLVCEDDNRPVGLIHIHD
LISLGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 7e-38 44
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 5e-38 44
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 1e-37 42