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Name : Cphamn1_0371 (Cphamn1_0371) Accession : YP_001958819.1 Strain : Chlorobium phaeobacteroides BS1 Genome accession: NC_010831 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 391883 - 393697 bp Length : 1815 bp Strand : + Note : PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: pol:Bpro_3983 polysaccharide biosynthesis protein CapD DNA sequence : GTGCTGCAGAAAACAATGCTTTCGCTGCCCTTAAGGGTAAAGCAGACTCTTGCGGTTATGCAGGATAGTCTGGCGGTAGT GTTTTCCGTATGGCTCGCCTATTCGCTTCGTTTTGAGGTATGGCATGTTCCTCAAAAAGCACAATGGCTGGTATATGGTA TCGCTCTGGCTATTTCTCTGCCTGTTTTTTATGGCACCAGCCTCTACAAGTCAGTCTTTCGCTTTAGTGAGGCTATGGCA TTTAAGCAGATAACAAAAGCTGCGGCACTCTATGCGGTGCTGTTTTTTTTTACTCTTGTCTTGTTCAAAATAGATGGGGT CCCGCGTTCAATCGGAATAACGCAGCCAATAATGCTTTTTCTGCTGCTTCTCGCAAGCAGAGGCGCAGCCCGTTTTTTTC TGAACACCCGCTTGCAGTTGGGTCATTGCAGTACTGCCGACAAGCGGTTGCTGATCTACGGTGTCGGATCGGCAGGAATT CAGCTCGCGTCAGCCATCGAACAAACTACCCGCCACCTTCTTATCGGTTTTATCGATGATGATCCCAAACTGCATGGACG GATGGTAAAAGGCCTGAAGGTATTTTCTTTTGGCCAGGTGGCCCGGCTTGTAGAACAGGCGACGGTTACCGACATTCTGC TGGCGATACCCTCTGCAAGCCGTTCAAGGCGCAATCAGATTTTGCAGGCGTTACAGCCGTTTCCCGTGCACGTGCAGACA CTTCCAAGCCTTGAGGATTTGACAGATGGCAATATTTCAGTCAGAGATGTAAAAGAGATTGAAATTGAAGACCTGCTTGG CCGTGATCCTGTTTCTTCCGGGCCATCTCTTTTCAGGCGTAACATTACCGGCAAGACCGTAGTTGTAACCGGTGCGGGGG GGAGTATCGGGAGAGAGTTGTGCAGGCAGATACTTATCGGGTGCGCCGATAAGCTCATTATGATTGATCATGCTGAATTC AATCTGCATGACGCATATCTCGAGCTGGAAGGGTACAGAGAAAGAAAACAGCAGGACACGGAGATTGTGCCTCTTTTGTG CAATGTGGCCGAGAACCATCGATTCAGCGCAATCTGCTCTTCATATCACCCGCATACCATTTACCATGCTGCGGCGTACA AACATGTTCCCATGGTTGAGCGCAATCCTGTCGAAGGCGTTCGGAATAATGTTTTCGGGACTCTTCGTTCAGCTCTTGCC GCGCAGGAATACGGCGTTGAAAGTTTTATCCTGGTCAGTACCGATAAGGCTGTTCGTCCAGCAAATTTCATGGGGGCGAG CAAGCGATTGTGTGAGATTATTCTTCAGGCGCTATCTGCTGAAGAGAACGGTAGCGGCACGTGTTTCTCTATGGTCCGTT TTGGTAATGTGCTGGATTCAAGTGGTTCTGTAGTGCCGCTTTTTCGCCAGCAGATAAAAGACGGCGGGCCTGTAACCGTA ACACATCCGGAAATAACCCGATATTTTATGACTATTCCGGAAGCTGTGCAGCTTGTTATTCAGTCAGGCGCGATGTCTCT GGGCGGAGAGGTTTTTGTCCTTGATATGGGTGAGCCTGTCAAGATAATTGATCTTGCGAAACGCATGATCGGATTGTCAG GTTTAACGGTATTGGACAGGAATAACAGAAAAGGTGATATTCCTATAGAAGTAATCGGCCTGCGTCCGGGGGAAAAGCTC TATGAAGAGCTGTTGATAAGCGGCGATCCTCAGCCGACTGATCACCCGAGGATATTCAAGGCGCATGAAGAGTTTATTGC ATGGCCGGCACTTCAGGATGAACTTTCGGAGATGGAGCAGGTTCTTAATACCTGA Protein sequence : MLQKTMLSLPLRVKQTLAVMQDSLAVVFSVWLAYSLRFEVWHVPQKAQWLVYGIALAISLPVFYGTSLYKSVFRFSEAMA FKQITKAAALYAVLFFFTLVLFKIDGVPRSIGITQPIMLFLLLLASRGAARFFLNTRLQLGHCSTADKRLLIYGVGSAGI QLASAIEQTTRHLLIGFIDDDPKLHGRMVKGLKVFSFGQVARLVEQATVTDILLAIPSASRSRRNQILQALQPFPVHVQT LPSLEDLTDGNISVRDVKEIEIEDLLGRDPVSSGPSLFRRNITGKTVVVTGAGGSIGRELCRQILIGCADKLIMIDHAEF NLHDAYLELEGYRERKQQDTEIVPLLCNVAENHRFSAICSSYHPHTIYHAAAYKHVPMVERNPVEGVRNNVFGTLRSALA AQEYGVESFILVSTDKAVRPANFMGASKRLCEIILQALSAEENGSGTCFSMVRFGNVLDSSGSVVPLFRQQIKDGGPVTV THPEITRYFMTIPEAVQLVIQSGAMSLGGEVFVLDMGEPVKIIDLAKRMIGLSGLTVLDRNNRKGDIPIEVIGLRPGEKL YEELLISGDPQPTDHPRIFKAHEEFIAWPALQDELSEMEQVLNT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-72 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Cphamn1_0371 | YP_001958819.1 | polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 2e-72 | 43 |
| Cphamn1_0371 | YP_001958819.1 | polysaccharide biosynthesis protein CapD | VFG0029 | Protein | 5e-93 | 42 |
