Gene Information

Name : Cphamn1_2413 (Cphamn1_2413)
Accession : YP_001960790.1
Strain : Chlorobium phaeobacteroides BS1
Genome accession: NC_010831
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 2574032 - 2574871 bp
Length : 840 bp
Strand : -
Note : PFAM: Integrase catalytic region; KEGG: pvi:Cvib_1308 integrase, catalytic region

DNA sequence :
ATGGTTGAGAAAGAACATCAAAACCTCAGCATGACACGGCAATGCGACCTGCTCTCGATTCACCGATCAGGGCTGTATTA
CCAGTCAAAAAAAACGTCGAAGCTGAACCTTGAGCTCATGCGGTTAATCGATCAGCAGTACCTGAAGAAACCGTACTACG
GCGTGTATCGCATGTGGCAATGGTTGGTCAGGGACAAGGGCTACAACATCAACATCAAGCGGGTCCGGCGGCTGCATCGT
CTTATGGGCATGGAAGCCATCGGGCCGAAGCCGAACACCTCCAAGCCCGCACCAGGGCACAAGGTCTATCCGTATCTGCT
TCGAGGCCTTGAGATCACGCATAGTAGCCATGTCTGGGCGACCGATATCACGTATGTGCCAATGGCTCAAGGCTTCATGT
ACCTGATGGCTGTCATCGACCTCAAAAGCCGCTATGTGCTGAACTGGTCGGTGTCAAATACCATGGAAGCCGAGTGGTGC
GCTGAAGTCTTCAGGGAGACCGTCAGGTTACATGGCGCCCCGGAAATCCTGAACACCGATCAGGGCTCACAGTTCACCAG
CGAAGTCTTCACCCGGGCAGTCATCGAAGAGGCCGGATCACAGCTCTCCATGGACGGGAAAGGCCGGGCAATCGACAACG
TTTTCATCGAACGGTTATGGCGAAGTGTCAAGTATGAGTACATTTACTATCGTCCTCCCGTTGACGGGTTGGAACTCTAT
CAGGGGCTGAAAGAATGGTTCATCGATTACAATACAGATCGGAGGCATACTGCCCTGAATGATGAGTTCCCAGAGACGGT
TTACAATCTTTACAAACTCAAGGCCCCGGAAGCAGCCTAA

Protein sequence :
MVEKEHQNLSMTRQCDLLSIHRSGLYYQSKKTSKLNLELMRLIDQQYLKKPYYGVYRMWQWLVRDKGYNINIKRVRRLHR
LMGMEAIGPKPNTSKPAPGHKVYPYLLRGLEITHSSHVWATDITYVPMAQGFMYLMAVIDLKSRYVLNWSVSNTMEAEWC
AEVFRETVRLHGAPEILNTDQGSQFTSEVFTRAVIEEAGSQLSMDGKGRAIDNVFIERLWRSVKYEYIYYRPPVDGLELY
QGLKEWFIDYNTDRRHTALNDEFPETVYNLYKLKAPEAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ACF06170.1 putative transposase Not tested Tn5036-like Protein 3e-50 49
ABK1_0264 YP_005512836.1 insB Not tested AbaR4d Protein 2e-40 47