Gene Information

Name : Cphamn1_1644 (Cphamn1_1644)
Accession : YP_001960045.1
Strain : Chlorobium phaeobacteroides BS1
Genome accession: NC_010831
Putative virulence/resistance : Resistance
Product : protein tyrosine phosphatase
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0394
EC number : -
Position : 1776557 - 1776991 bp
Length : 435 bp
Strand : +
Note : PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: pca:Pcar_1772 protein-tyrosine-phosphatase

DNA sequence : 
ATGCAAAAAATCACTGTTCTTTTTCTCTGTACCGGAAACTCCTGCAGAAGCCAGATGGCTGAGGGCTGGGCAAGGTATTT
ACATGGAGATATACTCGAGCCCTACTCAGCAGGAACGGAAATACACGGCATGAATCAGAACGCTGTCCAGGTCATGTCCG
AAGCTGGAGTAGACATCTCTTCACACCACTCAAAAAATATCGCAGAAGTACAGAACATCCCGTTTGATGTCATCATTACG
GTTTGTGATAACGCACATGAAAATTGCCCCTATTTTCCGGGTAGGGCAAAACGTATTCATGCCGGCTTCGATGACCCGCC
CCGTCTTGCACAATCGATTGAGGATCAGGAAAAAAAGCTGGACTGTTACCGAAAAGTCCGTGATGAAATCAGGGATTTCA
TCGCCCAGCTTCCCGATGCGCTCAAAGCCTCCTGA

Protein sequence : 
MQKITVLFLCTGNSCRSQMAEGWARYLHGDILEPYSAGTEIHGMNQNAVQVMSEAGVDISSHHSKNIAEVQNIPFDVIIT
VCDNAHENCPYFPGRAKRIHAGFDDPPRLAQSIEDQEKKLDCYRKVRDEIRDFIAQLPDALKAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsC YP_252023.1 arsenate reductase Not tested SCCmec Protein 7e-23 44
arsC YP_005754064.1 arsenate reductase Not tested Type-XI SCCmec Protein 7e-22 44
arsC YP_252016.1 arsenate reductase Not tested SCCmec Protein 2e-22 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cphamn1_1644 YP_001960045.1 protein tyrosine phosphatase BAC0581 Protein 3e-24 47
Cphamn1_1644 YP_001960045.1 protein tyrosine phosphatase BAC0032 Protein 9e-23 44
Cphamn1_1644 YP_001960045.1 protein tyrosine phosphatase BAC0580 Protein 2e-22 43