Gene Information

Name : Cphamn1_1479 (Cphamn1_1479)
Accession : YP_001959886.1
Strain : Chlorobium phaeobacteroides BS1
Genome accession: NC_010831
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1602507 - 1603241 bp
Length : 735 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cte:CT0953 ABC transporter, ATP-binding protein

DNA sequence :
ATGATGGATGCTTTCATGGAACATGAGACTGACAGCCCGGTGCTTCGTGTCGACAGGGTGAGCAAGATCTACACGATGGG
AGAAGTAGAGGTGCATGCGCTGAAGCATGTGTCGGTTGATTTTTATGCTGGTGAACTTGTTGTGCTTCTCGGCACTTCAG
GCAGCGGGAAATCAACCCTGCTCAATATCATCGGAGGTCTTGATGTTCCCTCGGAAGGAAAGCTGTATTTTCACAGTCAG
GAGATGACCGCAGCTTCTGAAGCGGAAATGACCGCCTATAGACGTGAATCCATAGGGTTTGTCTTTCAGTTCTACAATCT
TATTTCCAGTCTTACAGCGCTTGAAAATATTCAGCTTGTCACGGAAATATCGACTCAGCCCATGCCTGCTGAAGAGGCGT
TGAGAAGAGTCAATCTTGGTGATCGCATGAACCATTTTCCATCGCAGCTTTCAGGGGGAGAGCAGCAGCGTGTCGCAATT
GCCCGTGCTGTGTCCAAGAGGCCGGAACTGCTGCTTTGTGATGAACCGACAGGCGCGCTGGACTATGAAACCGGTAAACT
GGTGCTGGATGTTATACGCAAGGTAAACGAGGAGCTCGGGACAACGACTCTGGTGATCACGCACAATGTTTCAATCGCCG
CTATGGCAGACAGGGTGATTCATATGCGGAGCGGAGAGATTACGGAGATAGAGCGAAATGAGAGAAAACTTTCCCCTTCC
GAACTGAGCTGGTAG

Protein sequence :
MMDAFMEHETDSPVLRVDRVSKIYTMGEVEVHALKHVSVDFYAGELVVLLGTSGSGKSTLLNIIGGLDVPSEGKLYFHSQ
EMTAASEAEMTAYRRESIGFVFQFYNLISSLTALENIQLVTEISTQPMPAEEALRRVNLGDRMNHFPSQLSGGEQQRVAI
ARAVSKRPELLLCDEPTGALDYETGKLVLDVIRKVNEELGTTTLVITHNVSIAAMADRVIHMRSGEITEIERNERKLSPS
ELSW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-31 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cphamn1_1479 YP_001959886.1 ABC transporter-like protein NC_012469.1.7685735. Protein 2e-51 50
Cphamn1_1479 YP_001959886.1 ABC transporter-like protein CP001581.1.gene798.p Protein 8e-37 44
Cphamn1_1479 YP_001959886.1 ABC transporter-like protein NC_008702.1.4606598. Protein 8e-28 43
Cphamn1_1479 YP_001959886.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-33 42