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Name : Cphamn1_1145 (Cphamn1_1145) Accession : YP_001959564.1 Strain : Chlorobium phaeobacteroides BS1 Genome accession: NC_010831 Putative virulence/resistance : Unknown Product : TetR family transcriptional regulator Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 1228110 - 1229336 bp Length : 1227 bp Strand : - Note : TIGRFAM: integron integrase; PFAM: integrase family protein; KEGG: aeh:Mlg_1799 integron integrase DNA sequence : ATGAATTTTCGAGACTTTCTCCTGCAAAAACAACATATCCCGGAGAAGAAAGTCCCGTATTATCTTCGATGGGTGTCGCA GTATCAAAAATTCTGCCGCCATAACCCGGATCAGGGAATCCCCCCTGAATCGGTAACTTTATTCCTTTCAGAGTTGGCAA AAAGCCATGAAGACTGGCAGGTTTTGCAGGCAAGAGATGCGGTAAGGCTGTATCTGTATTTTTCCGACACCTCTCTTAGC ATTAACCGTACAGTGCCGTCATGCGATCATGAATGGACCGAGATCGACGAAAGAATGACACATGCTCTCCGTCTTCGCCA CCGCTCATATCGGACAGAACAAAGCTATAAAGCTTGGGTCAGACGTTTTGGCGCGTTTCTTGAACATAAGTCACCTCAAG CTGTTGAACAGTCCGATCTTCAACGATTTCTCAGCAGCCTTGCGGTCGAGAGAAGAGTTTCGGCTTCTACCCAGAATCAG GCGTTTAATGCGCTTCTTTTTCTTTTCCGTCATGTTCTCGACAAAAAGGTTTCTGGAATGGAAGCAACTGTTCGTTCGAA CAGACCAAGAAAATTACCGGTTGTCCTTTCGCGGGAAGAGGTTCGAAGCATTCTTGAGATCATGAATGAAGTCACCTGGT TGATGGCCTCATTGATTTATGGAGGAGGACTTCGCATTGATGAATGTCTGAAACTGAGAATCAAGGATATCGATTTCGAC AGAGGATTCCTGACCGTGAGAAGCGGCAAGGGTAACAAGGACCGTCAGACGCTTTTTCCGAAAAATCTTGCAGAACCATT GCGAAATCATCTATCTGAAATCAGGAACATTCACGAAGAGGACAGACGCAACGGTATCGAGGGTGTTTCGATGCCCGGGG CCCTTGCATACAAATATCCCAATGCCGGAAAAGAATGGGGCTGGTTCTGGGTGTTCCCTTCGGCGAACTTGTCGGCCGAT CCAGTAACGAACACCATAAGACGCCACCACATGTACCCGACGACAGTGCAAAAGGCGTTTAAACAGGCTCGTGAGAAAGC CGGAGTTGTCAAACAGGCATCTGTGCACACGCTCAGACACAGCTTTGCGACGCATTTGCTGGAAGCTGGCTATGATATCC GAACCGTGCAGGAATTACTTGGCCATGCCAATCTGCAAACAACGATGATCTACACGCACGTGGCAAAAAAAAATATGCTG GGTGTCGTCAGTCCTCTGGATATGTAA Protein sequence : MNFRDFLLQKQHIPEKKVPYYLRWVSQYQKFCRHNPDQGIPPESVTLFLSELAKSHEDWQVLQARDAVRLYLYFSDTSLS INRTVPSCDHEWTEIDERMTHALRLRHRSYRTEQSYKAWVRRFGAFLEHKSPQAVEQSDLQRFLSSLAVERRVSASTQNQ AFNALLFLFRHVLDKKVSGMEATVRSNRPRKLPVVLSREEVRSILEIMNEVTWLMASLIYGGGLRIDECLKLRIKDIDFD RGFLTVRSGKGNKDRQTLFPKNLAEPLRNHLSEIRNIHEEDRRNGIEGVSMPGALAYKYPNAGKEWGWFWVFPSANLSAD PVTNTIRRHHMYPTTVQKAFKQAREKAGVVKQASVHTLRHSFATHLLEAGYDIRTVQELLGHANLQTTMIYTHVAKKNML GVVSPLDM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| intI1 | AGF35026.1 | IntI1 integrase | Not tested | SGI1 | Protein | 2e-69 | 50 |
| intI1 | YP_005797145.1 | integrase | Not tested | AbaR4e | Protein | 3e-70 | 50 |
| intI1 | AGK06930.1 | IntI1 integrase | Not tested | SGI1 | Protein | 2e-70 | 50 |
| intI1 | CAB46685.1 | DNA integrase | Not tested | Not named | Protein | 2e-69 | 50 |
| intI1 | ACN81019.1 | IntI1 integrase | Not tested | AbaR5 | Protein | 3e-70 | 50 |
| intI1 | AGK06967.1 | IntI1 integrase | Not tested | SGI1 | Protein | 2e-70 | 50 |
| unnamed | AAL08437.1 | Tn21 integrase IntI1 | Not tested | SRL | Protein | 7e-70 | 50 |
| intI1 | AAK02045.1 | integrase | Not tested | SGI1 | Protein | 2e-69 | 50 |
| intI1 | AGK07013.1 | IntI1 integrase | Not tested | SGI1 | Protein | 2e-70 | 50 |
| unnamed | ACF06155.1 | class 1 integrase | Not tested | Tn5036-like | Protein | 4e-70 | 50 |
| intI1 | ABZ01842.1 | IntI1 | Not tested | SGI2 | Protein | 2e-69 | 50 |
| intI1 | AGK07071.1 | IntI1 integrase | Not tested | SGI1 | Protein | 2e-70 | 50 |
| intI1 | AGK07098.1 | IntI1 integrase | Not tested | SGI1 | Protein | 4e-70 | 50 |
| intI | CAJ77028.1 | Integrase | Not tested | AbaR1 | Protein | 2e-69 | 50 |
| intI1 | AFV53119.1 | IntI1 integrase | Not tested | AbGRI2-1 | Protein | 2e-70 | 50 |
| intI1 | ABB48427.1 | IntI1 integrase | Not tested | SGI1 | Protein | 2e-70 | 50 |
| intI1 | ACY75520.1 | integrase | Not tested | Tn6060 | Protein | 2e-69 | 50 |
| EC042_4092 | YP_006098375.1 | integrase | Not tested | Tn2411 | Protein | 5e-70 | 50 |
| intI1 | AGK36642.1 | IntI1 integrase | Not tested | AbaR26 | Protein | 2e-70 | 50 |
| intI | CAJ77082.1 | Integrase | Not tested | AbaR1 | Protein | 2e-70 | 50 |
| intI1 | ACY75535.1 | integrase | Not tested | Tn6060 | Protein | 2e-69 | 50 |
| intI | YP_001844881.1 | integrase | Not tested | AbaR20 | Protein | 3e-70 | 50 |
| intI1 | AGF34986.1 | IntI1 integrase | Not tested | SGI1 | Protein | 2e-69 | 50 |
| intI1 | YP_005797130.1 | integrase | Not tested | AbaR4e | Protein | 3e-70 | 50 |
| intI1 | AGF35060.1 | IntI1 integrase | Not tested | SGI1 | Protein | 2e-70 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Cphamn1_1145 | YP_001959564.1 | TetR family transcriptional regulator | VFG1028 | Protein | 4e-70 | 50 |
