Gene Information

Name : metC3 (BLD_0913)
Accession : YP_001954857.1
Strain : Bifidobacterium longum DJO10A
Genome accession: NC_010816
Putative virulence/resistance : Resistance
Product : cystathionine gamma-synthase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 1051060 - 1052244 bp
Length : 1185 bp
Strand : -
Note : catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine

DNA sequence :
ATGTCCGCTGAATACAACGCCAAGTTCGCCAACACCGACATCGCCACTCGCGCCATCCACGCCGGCCAGGAGCCCGACCC
GACTACCGGTGCGGTCGTCACGCCGATCTTCGCCACCTCCACTTTCAAGCAGGATGGCGTGTTGGGCCTCAGGGGAGGCC
ACGACTACTCCCGCTCCATCAACCCCACTCGCACCAGCTTCGACGAGCAGCTCGCCGCCGTGGAAGGCGGCAAGTACGCG
CTGAGCTTCTCCTCGGGCTTGGCCGCCATCGACGTGCTGCTGCGCTCCACCATCAAGCCCGGCGACAACATCCTGCTCGG
CAACGATGTGTACGGCGGCACCTACCGCCTGCTCTCCAAGGTGTTCGTGCCGTGGGGTGTGGGCCTCGACGTGGTGGACA
TCACCGATCTGAAAGCCGTGGAAACCGCATTGGCCTCCAAGCACTACCAGTATGTGTGGGTCGAGACCCCGTCCAACCCG
CTGCTCAACATCACCGACATCGCGGCCACCACCGAAGTCGCCCACAAGTACGGCACCAAGGTCGCTGTCGACAACACCTT
CGCCTCGCCCGCCCTTCAGCACCCGCTGGCCGATGGCGCCGATGTGGTGGTCTACTCCACCACCAAGTACATCGGCGGCC
ACTCCGACGTGGTCGGCGGTGCCGTGGTGGTCAACGATGAGGAGACCCGCGAGAAGGTCGCCTTCCTGCAGAACGCCGCC
GGCGCAGTGCCCTCCCCGTTCGACTCCTGGCTGGACATCCGCGGCCTGAAGACCCTGGATCTGCGCGTCAAGCGCCACAG
CGCCAACGCCCTGAAGGTGGCCGAATGGCTCGAATCCCAGCCCTCTGATGTGATTGAGCGCGTCTGGTACCCGGGCCTCG
AGTCCCACCCGGGTCATGAAATCGCCGCCCGCCAGATGCACGGCGGCTTCGGCGGCATCGTCTCCGTGCAGCTCGCGGCC
GGCGCCGAGGCGGCCAAGCACTTCGTGGACCACACGCAGATCTTCACACTGGCCGAATCGCTCGGCGGTGTGGAAAGCCT
CATCGAGGTGCCCGCCGCCATGACCCACGCCTCCGTGGCCGGCACCACCCTGCAGGTGCCCGCCAACCTGGTGCGCATTT
CGGTCGGTATCGAGAACGCCGACGACCTTATCGCCGATCTCAAGCAGGCGTTGGATCGTATCTGA

Protein sequence :
MSAEYNAKFANTDIATRAIHAGQEPDPTTGAVVTPIFATSTFKQDGVLGLRGGHDYSRSINPTRTSFDEQLAAVEGGKYA
LSFSSGLAAIDVLLRSTIKPGDNILLGNDVYGGTYRLLSKVFVPWGVGLDVVDITDLKAVETALASKHYQYVWVETPSNP
LLNITDIAATTEVAHKYGTKVAVDNTFASPALQHPLADGADVVVYSTTKYIGGHSDVVGGAVVVNDEETREKVAFLQNAA
GAVPSPFDSWLDIRGLKTLDLRVKRHSANALKVAEWLESQPSDVIERVWYPGLESHPGHEIAARQMHGGFGGIVSVQLAA
GAEAAKHFVDHTQIFTLAESLGGVESLIEVPAAMTHASVAGTTLQVPANLVRISVGIENADDLIADLKQALDRI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-71 45
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-72 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metC3 YP_001954857.1 cystathionine gamma-synthase BAC0207 Protein 1e-62 42