Gene Information

Name : BLD_0903 (BLD_0903)
Accession : YP_001954847.1
Strain : Bifidobacterium longum DJO10A
Genome accession: NC_010816
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 1036000 - 1036875 bp
Length : 876 bp
Strand : -
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGACGCAGAATCGTGCGGAACTCAACCGTAATCTGGCCCAGATGCTCAAGGGTGGCGTGATCATGGACGTCACCACGCC
CGAACAGGCGAAAATCGCGCAGGATGCCGGCGCGTGCGCGGTGATGGCGCTGGAGCGCATCCCCGCTGACATTCGTGCCG
CCGGCGGCGTCTCCCGTATGAGCGATCCGGCCATGATCAAGGGCATTCAGGAAGCTGTCTCCATTCCGGTCATGGCCAAG
GTGCGTATCGGCCACATCGCCGAGGCCCGCATTCTGCAGGCCATCGACATCGACTACATCGACGAATCCGAAGTGCTTTC
CCCGGCCGACGACGTGTACCACATCGACAAGAACCAGTTCGACGTGCCGTTCGTGTGTGGCGCGAAGAACCTGGGCGAGG
CGCTGCGCCGCATCGCCGAGGGTGCTGCCATGATTCGTACCAAGGGCGAGCCCGGCACCGGCGACGTGATTCAGGCCGTG
CGCCACATGCGCACCATGAACAAGCAGATCCGCGAGCTCGTGGCCTTGCGCGACGACGAGGTCTACGAGGCCGCCAAGCA
GCTGGCCGTGCCCTACGACCTGGCCAAGTACGTGCACGACAACGGCCGTCTGCCCGTCGTGAACTTCGCCGCCGGTGGCG
TGGCCACCCCGGCCGACGCCGCCCTGATGATGGAGCTCGGTGCCGAAGGCGTGTTCGTGGGCTCCGGCATCTTCAAGTCC
GGCGACCCGGCCAAGCGCGCCGCCGCCATCGTCAAGGCCACCGCCAACTGGCAGGACGCCGATCTGCTCGCCAAGCTGTC
CGAAAACCTCGGCGAAGCCATGGTCGGCATCAACGAGGACGAGATTCAGACCATCATGGCCGCTCGCGGCGAGTGA

Protein sequence :
MTQNRAELNRNLAQMLKGGVIMDVTTPEQAKIAQDAGACAVMALERIPADIRAAGGVSRMSDPAMIKGIQEAVSIPVMAK
VRIGHIAEARILQAIDIDYIDESEVLSPADDVYHIDKNQFDVPFVCGAKNLGEALRRIAEGAAMIRTKGEPGTGDVIQAV
RHMRTMNKQIRELVALRDDEVYEAAKQLAVPYDLAKYVHDNGRLPVVNFAAGGVATPADAALMMELGAEGVFVGSGIFKS
GDPAKRAAAIVKATANWQDADLLAKLSENLGEAMVGINEDEIQTIMAARGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-77 68
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 1e-77 68
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-77 68