Gene Information

Name : pykF (BLD_0741)
Accession : YP_001954685.1
Strain : Bifidobacterium longum DJO10A
Genome accession: NC_010816
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 850175 - 851617 bp
Length : 1443 bp
Strand : -
Note : -

DNA sequence :
ATGCGTAAAGCCAAGATCGTAGACACCATCGGTCCTTCCACCGAGGATTACGACAACCTCCTGAAGCTCGTTGAAGCTGG
TATGGACGTTGCTCGTCTGAACCGCTCCCACGGCACCCCCGAGGATCACCTCAAGGTCTACAACAACGTGCGCAAGGCCA
GCGAAGCCACTGGTCGCAACGTTGCCGCGCTCGTTGATTTGCAGGGCCCGAAGATTCGCTGCGGTTGGTTCAAGAAGAAC
GCCGATGGCGAAGACAAGGTTCAGCTGCAGCTCGGCCAGGAATTCGTCATCACCACTGATGACGTCGAGGGCGACGAGCA
CATCACCTCCACCACCTTCAAGGGCCTGCCGGGCGATTGCCACCCGGGCGACCCGATCCTGATCGACGACGGCAAGGTCC
GTCTTGAGGTCACCAAGGTCGAGGGCAACAACGTGTACACCAAGGTCGTCGTGGCCGGTCCTGTGTCCTCCCACAAGGGC
ATCAACCTGCCGGGCGTCGCCGTCTCCCTGCCGGCTCTGACCGAGAAGGATGAGGCCGACCTGCGTTGGGCCATCCGCAC
CGGTGCCGACGTCATCGCCATGTCCTTCGTGCGTTTCGCCACCGACATCGACCGCGCCCACGAGATCATGGACGAGGAAG
GCCGTCGCATCCCGATCATCGCCAAGATCGAGAAGCCGCAGGCTCTGGAGAACCTCGAAGAGATCGTCAAGACCTTCGAC
GGCGTCATGGCCGCCCGTGGCGACATGGCCGTTGAGTGCCCGCTGGAAGAGGTCCCGCTGGCCACTAAGCGCATCATCGA
GCTGGCTCGCCAATACGCCAAGCCGGTCATCGTGGCTACCGAAGTCCTCGGCTCCATGGTGAACTCCCCGGTTCCGACTC
GTGCAGAGGCTTCCGACTGCGCCAACGCCATCCTCGACGGCTCCGACGCCACCATGACCTCCAACGAGACCGCCGTTGGT
AAGTACCCGGATGTGACCGTGGCCACCATGGCCCGTATCTCCGGCTACGCCACCGACCACGGCTTCGACCGCATCCCGGA
GCTCAAGAACCTTGACATGTCCTCCACCGGCGCTGTCTCCTCCGCCGCTGTGGACCTGGCCGACAAGCTCAACGCCAAGG
CCATCGTTGCTTACACCCAGACCGGCGCCACCGTGCACCGCGTCTCCCGTGAGCGTCCGGCCGCCCCGATCTACGGCCTG
ACCAGCAACGAGCACACCTACCACTGGCTGGCTCTGTCCTGGGGCACCGAAGCCTTCCTGCTCAAGGAGGACTACCACGA
CAAGTCCCGCAAGGATCTCATGATCTACACGGACAAGGTCCTCAAGGATGCCGGCAAGGTTGCTGACGGCGACAAGATCG
TCATCCTGAGCTCTGCTCAGGGCGAGCACCAGCCGGGCCGCACTGACTCCATCTACGTGCACACCGTTGGCGCTTGCGAC
TGA

Protein sequence :
MRKAKIVDTIGPSTEDYDNLLKLVEAGMDVARLNRSHGTPEDHLKVYNNVRKASEATGRNVAALVDLQGPKIRCGWFKKN
ADGEDKVQLQLGQEFVITTDDVEGDEHITSTTFKGLPGDCHPGDPILIDDGKVRLEVTKVEGNNVYTKVVVAGPVSSHKG
INLPGVAVSLPALTEKDEADLRWAIRTGADVIAMSFVRFATDIDRAHEIMDEEGRRIPIIAKIEKPQALENLEEIVKTFD
GVMAARGDMAVECPLEEVPLATKRIIELARQYAKPVIVATEVLGSMVNSPVPTRAEASDCANAILDGSDATMTSNETAVG
KYPDVTVATMARISGYATDHGFDRIPELKNLDMSSTGAVSSAAVDLADKLNAKAIVAYTQTGATVHRVSRERPAAPIYGL
TSNEHTYHWLALSWGTEAFLLKEDYHDKSRKDLMIYTDKVLKDAGKVADGDKIVILSSAQGEHQPGRTDSIYVHTVGACD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 8e-64 44
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 7e-64 44
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 7e-64 44
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 2e-63 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pykF YP_001954685.1 pyruvate kinase VFG0479 Protein 3e-64 44