Gene Information

Name : oppA1 (BLD_0252)
Accession : YP_001954196.1
Strain : Bifidobacterium longum DJO10A
Genome accession: NC_010816
Putative virulence/resistance : Unknown
Product : oligopeptide ABC transporter periplasmic protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG4166
EC number : -
Position : 316304 - 317944 bp
Length : 1641 bp
Strand : +
Note : -

DNA sequence :
ATGAAGAAGAAAGCTCTTGCTTTCGCTGCCATGGCTTGCTCCGTGGCCATGCTGCTGAGCGCCTGCGGCGGCTCCAACAG
TAACGCTGCCTCCGGTGACACCGCTGGCTCCAACATCATCACTGCGTACAACTCCGAACCGCAGAACCCGCTGATCCCGG
GCAACACCAACGAAACCGGCGGCGGCAAGCCGGTCGACCTGCTGTTCTCCCGTCTGGTCTCCTTCGACAAGGACGGCAAG
GCTTCCAACGAAGTGGCCGAGTCCATCACCCCGAACGATGACGCCACCCAGTACACCATCAAGATCAAGTCTGGCTGGAA
GTTCACCGACGGCACTCCGGTGACCGCTGAGTCCTTCACCAAGGCTTGGTCCTACGTGGCCAACGCCAAGAACGCCCAGA
AGTGCTCCTCCTTCTTCTCCGCCATCGCCGGCTATGACGATCTGCAGAAGGATGGCCTCAAGGGTGACGAGCAGCTCTCC
GGCCTCAAGGTCGTGGACGACACCACCTTCACCGTCGACCTGAACCAGTCCGACTCCGTGTTCCCGATTAAGGTCGGCTA
CTCGGCCTTCGCCCCGCTGCCTGAGTCCTTCTACAAGGACCCGAAGGCCTTCGGCGAGGCTCCTGTGGGCAACGGCCCGT
ACAAGTTCTCCAAGTGGGACCACAACAAGGAAATCGCCCTCGTCAAGAACCCTGACTACAAGGGCAACGAGGACGTCAAG
AACGATGGCGTGACCTTCAAGGTCTACACCGACGACTCCGCCGCCTACCGCGACATTCAGGCCGGCAACCTCGACGTGAT
GGAGTCCGTCCCGGCCGCCTTCACCAAGACCTTCAAGACCGACAAGAAGGTCCAGGCTTACTCCGAGGCCGGCTCCGTCA
TCCAGACCTTCACCATCCCGTCCTCCCTTGACCACTTCAAGAACGACGAGGAAGGCCAGCTGCGTCGCCAGGCCATCTCC
ATGGCCCTCAACCGCAAGCAGCTCATCGACAAGGTGCTCAACGGCAACGCCACCGCCGCCACCGAGTTCACCTCCCCGAA
GACCCCGGGCTACTCCGACTCCCTCAAGGGTGCCGACAACCTGAAGTTCAACGCCTCCAAGGCCAAGGAACTGTGGGCCA
AGGCTGACGCCATCTCCAAGTACGACGGCCAGCTCACCTTCTCCTACAACGCCGATGGTGGTGCCAAGCCGCTTTACGAC
GCCGTCGTGAACCAGCTCAAGAACAACTTGGGCATCGACGCGGCCACCAACCCGATCCCGACCTTCCAGGAATTCCGTGA
CGCGGTCACCAACCGTCAGATGAAGGGCGCCTTCCGTACCGGCTGGCAGCCTGACTACCCGTCCGCCGAGAACTACCTGT
GGCAGCTGTACTCCACCGCTGCTGCTGATGGCAACGGCTCCAACGATGGTGACTACAAGAGCCCGGCCTTCGATGACCTG
TGCAAGCAGGCTGCTGCCGCTTCCAGCACTGATGACGCCAACAAGCTGTATCAGCAGGCTGAGGAAATCCTCCTCAACGA
CCTTCCGGCCATCCCGCTGTACTACTCCAACGCCTCCGGTGTGGCTTCCCTCAACGTGAAGTCCGGCTACGCCTTCGATT
GGCAGAACCTCCCGACCTACACCGAGATGTCCAAGAAGTGA

Protein sequence :
MKKKALAFAAMACSVAMLLSACGGSNSNAASGDTAGSNIITAYNSEPQNPLIPGNTNETGGGKPVDLLFSRLVSFDKDGK
ASNEVAESITPNDDATQYTIKIKSGWKFTDGTPVTAESFTKAWSYVANAKNAQKCSSFFSAIAGYDDLQKDGLKGDEQLS
GLKVVDDTTFTVDLNQSDSVFPIKVGYSAFAPLPESFYKDPKAFGEAPVGNGPYKFSKWDHNKEIALVKNPDYKGNEDVK
NDGVTFKVYTDDSAAYRDIQAGNLDVMESVPAAFTKTFKTDKKVQAYSEAGSVIQTFTIPSSLDHFKNDEEGQLRRQAIS
MALNRKQLIDKVLNGNATAATEFTSPKTPGYSDSLKGADNLKFNASKAKELWAKADAISKYDGQLTFSYNADGGAKPLYD
AVVNQLKNNLGIDAATNPIPTFQEFRDAVTNRQMKGAFRTGWQPDYPSAENYLWQLYSTAAADGNGSNDGDYKSPAFDDL
CKQAAAASSTDDANKLYQQAEEILLNDLPAIPLYYSNASGVASLNVKSGYAFDWQNLPTYTEMSKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDBH8_0922 YP_005160014.1 putative peptide transport system secreted protein Not tested Not named Protein 2e-112 50