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Name : serS (BLD_1760) Accession : YP_001955703.1 Strain : Bifidobacterium longum DJO10A Genome accession: NC_010816 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 2103185 - 2104471 bp Length : 1287 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTTGATATTCAATTCATCCGTGAACACACCGATATCGTCAAGGAATCCCAGCGCAAGCGCGGCGAGTCCGTGGAACT CGTCGACGAAGTGCTCTCCTCCGACACCGCACGTCGTGAGGCGCTGAAGGCCTTCGAAGAGGCTCGCGCCCAGCAGAAGG AAATCGGCAAGAAAGTCGCCTCCGCCCCGGCGGACGAGAAGGCCAAGCTCATCGCCGAAACCAAGGAACTGTCCCAGAAG GTCTCCGAATACAAGTCCAAGGCCGATTCCGCAGCCGAGGAATACACCACCGCCATGTGGAAGCTCTCCAACATCGTGGA GCCCGAAGCTCCCGAAGGCGGCGAGGATGACTACGTGGTCGTCAAGAAGGTTGGCCAGATTCGCGACTTCGCGGCCGAAG GCTTCGAGCCCAAGGACCACCTGACCCTCGGCACCGGCGTGGCCGGCATCGACATGCGCCGCGGCGTCAAGGTCGGCGGC TCCCGCTTCTACTTCCTGCGTGGCCAGGTGGCCCGCATGCAGATTGCCATGCTCACCATGGCCGTGGACCAGGCCGAAGA GCACGGCTTCACGCTGGCCATCACCCCGACGCTGGTGCGCCCCGAGGTCATGCGCGGCACCGGCTTCCTGAACTCCCACG CCGACGAGATCTACCGTCTGCGCGAGCCCGATGACCAGTACCTGGTCGGCACTTCCGAAGTGGCGCTCGCCGGCATGCAC GAGAACGAGATCCTCGACCTCGGCAACGGCCCGCTGCGCTACTGCGGTTGGTCCTCCTGCTACCGCCGCGAGGCCGGTGC CGCAGGCAAGGATACTTCCGGCATCATCCGCGTCCACCAGTTCGACAAGGTGGAGATGTTCGTTTACGCCAAGCAGGAGG ACTCCTACAAGGAGCACGAGCACCTGCTGGCCATGGAACAGGAGATGCTCGCCAAGGTCGAAGTGCCCTACCGCATCATC GACACCGCAGCCGGCGACCTCGGCTCCTCCGCCGCCCGCAAGTTCGACTGCGAGGCCTGGGTCCCGACCCAGGGCCGCTA CCGCGAGCTCACCTCCACCTCGAACTGCACCGAGTACCAGGCTCGCCGTCTGAACATCCGCGAGCGTATGGAAGATGGCG GCACCCGTCCGGTCTCCACGCTCAACGGCACGCTGGCCACCACCCGTTGGCTGGTCGCCATCATGGAGAACCACCAGCAG AAGGACGGCTCCATCGAGATTCCGCAGGCCATGCGCGCCTACATGGGCGGCAAGGAAGTCATCGAGCCCACTAAGTGGGA GGCCTGA Protein sequence : MLDIQFIREHTDIVKESQRKRGESVELVDEVLSSDTARREALKAFEEARAQQKEIGKKVASAPADEKAKLIAETKELSQK VSEYKSKADSAAEEYTTAMWKLSNIVEPEAPEGGEDDYVVVKKVGQIRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVGG SRFYFLRGQVARMQIAMLTMAVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRLREPDDQYLVGTSEVALAGMH ENEILDLGNGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYAKQEDSYKEHEHLLAMEQEMLAKVEVPYRII DTAAGDLGSSAARKFDCEAWVPTQGRYRELTSTSNCTEYQARRLNIRERMEDGGTRPVSTLNGTLATTRWLVAIMENHQQ KDGSIEIPQAMRAYMGGKEVIEPTKWEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-61 | 41 |
