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Name : clpA2 (BLD_1585) Accession : YP_001955528.1 Strain : Bifidobacterium longum DJO10A Genome accession: NC_010816 Putative virulence/resistance : Virulence Product : ATP-binding subunit of Clp protease Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1888542 - 1891211 bp Length : 2670 bp Strand : + Note : - DNA sequence : ATGGAACAGAAGTTCACCACTATGGCCCAAGAAGCCGTCGGCGACGCGATTCAGAGTGCGTCCGCCGCAGGAAACGCGCA GGTCGAGACCCTGCACGTCATGGATGCGCTGCTGCGCCAGGAAAACGGCGTGGCGCGCTCTCTGATCGAGGCCGCGGGCG GGGACCCGCAGGCCATCGGCGCGGCGGTGCGCAACGCTTTGGTCGCGCTGCCGAGCGCATCCGGATCCAGCACCTCGCAG CCACAGGCCAGCCGCCAGCTGACCGCCGCCATCGCCCAGGCTGAGAAGGAAATGCAGCAGATGGGCGACGAATACGTCTC CACCGAACATCTGCTTATCGGCATCGCGGCCAGCAAGCCGAACCAGTCGGCCGAAATCTTGGAGAAGAACGGCGTCACCG CAGCCTCCCTGCGCAAGGCCGTACCCGGCGTGCGTGGTGGCGCGAAGGTCACCAGCCCGGACGCGGAAGGCTCGTACAAG GCCCTAGAGAAGTACTCCACCGACCTGACGGCCGCCGCCAAGGAAGGCAAGCTGGACCCGGTCATCGGACGTGACCAGGA AATCCGCCGCGTGATTCAGATCCTCTCCCGTCGTACCAAGAACAACCCGGTGCTGATCGGCGAGCCCGGCGTCGGCAAGA CCGCCGTCGTGGAAGGCCTGGCCCAGCGTATCGTGGCGGGCGACGTGCCCACCACCCTGCAAGGCAAGAAGCTCATCTCC CTTGACCTAGGCTCCATGGTGGCCGGTTCGAAGTACCGTGGCGAGTTCGAGGAGCGCCTGAAGAGCGTCCTGAACGAAAT CAAGAATGCGGATGGTCAGATCATCACCTTCATCGACGAGATCCACACCATCGTCGGCGCGGGTGCGGCCGAAGGCTCGA TGGACGCCGGCAATATGTTGAAGCCCATGCTGGCCCGTGGCGAGCTGCGCCTGATCGGCGCGACCACGCTGGACGAGTAC CGCGAGAACATCGAAAAGGATCCGGCATTGGAACGCCGTTTCCAACAGGTGTTCGTGGGCGAGCCGAGCGTGGAAGACAC CATCGCCATCCTGCGTGGCCTGAAGCAGCGTTACGAGGCGCACCATAAGGTAACGATCGGCGACGACGCGCTGGTCGCCG CCGCGACCCTCTCGAACCGGTACATCTCAGGCCGTCAGCTGCCGGACAAGGCCATCGACCTGGTCGATGAGGCGGCCGCT CACCTGCGTATGGAGCTCGACTCCTCGCCTGAGGAGATCGATGAGCTGCAGCGCAAGGTGACCCGTCTTGAAATGGAGGA AATGCAGCTCAAGAAGGCCGAGGATCCTGCGTCCAAGGAGCGTCTGGGCAAGCTGCAAGCCGAACTTGCGGACACCCGTG AGAAGCTCAGCGGTCTCAAGGCGCGTTGGGATGCGGAACAGGCTGGCCACAACAAGGTCGGCGACCTGCGTGCCAAGCTC GACGACCTGCGCGTGCAGGCGGATAAGTATACCCGTGAAGGCAACTTGGCGGAGGCCTCGAAGATTCTGTACGGCGAGAT TCCGTCCATTCAGAAGGAGCTTGCCGCCGCGGAGAGCGCGGATGCTGAATCTGCTGATGCCAGCGCGGCCAACCCGGCCG ATGAGCCGATGGTCCCGGACCGTGTGGACGCCGACTCGGTGGCTGAGATCGTCTCCGACTGGACCGGCATTCCCGTCGGC CGCCTGATGCAGGGCGAAAACGAGAAGCTGCTGCACATGGAGGACTACCTCGGCAAGCGTGTGATCGGCCAGAAGGAAGC CATCGCCGCCGTGTCCGACGCGGTGCGCCGTTCGCGTGCCGGCATCTCCGACCCGAACCGTCCGACCGGATCGTTCCTGT TCCTCGGCCCCACCGGTGTGGGCAAGACCGAACTGGCCAAGGCGCTCGCCGACTTCCTGTTCGACGACGAGAAGGCCATG GTCCGCATCGACATGTCCGAATACATGGAGAAGGCTTCGGTCTCGCGCCTGATTGGCGCGGCGCCGGGCTACGTGGGCTA CGAGCAGGGCGGCCAGCTGACCGAGGCCGTGCGCCGTCGCCCGTATTCCGTGGTGCTGTTCGACGAGGTCGAGAAGGCCA ACCCGGAGATCTTCGACGTGCTGCTGCAGGTACTTGACGATGGTCGCCTGACCGATGGCCAGGGAAGGACCGTGGACTTC AAGAACACGATCCTGATTATGACCTCTAACCTCGGCTCGCAGTTCCTCGTGAACGAGGACATGGACGCCGACGCCAAGAA AAAGGCCGTGATGGACGCTGTCCACATGAACTTCAAGCCGGAGTTCCTGAACCGTCTGGACGACATCGTCATGTTCCACC CGCTTACGCGCGAGGAGCTTGGCGGCATCGTGGATATCCAGGTGGCTGGCGTGTCCCAGCGTCTGACCGATCGCCGCATC ACGCTGGACGTCACCGACTCGGCTCGCGAATGGCTTGCCAACACCGGTTACGACCCGGCTTATGGCGCTCGTCCGCTGCG CCGCCTGGTACAGACCGAAGTGGGCGACCAGCTGGCCCGTATGCTGCTGGCCGGCAAGGTCCACGACGGTGACACCGTGC TCGTCGACCAGACCGGCGGCGAACATCTGGAGCTCTCCGCTTGGGCGAGCGACCAGATTGTCTCCGACAATCCGGACGTG AGCGTGGACAACGTCACCGAAGACAAGTGA Protein sequence : MEQKFTTMAQEAVGDAIQSASAAGNAQVETLHVMDALLRQENGVARSLIEAAGGDPQAIGAAVRNALVALPSASGSSTSQ PQASRQLTAAIAQAEKEMQQMGDEYVSTEHLLIGIAASKPNQSAEILEKNGVTAASLRKAVPGVRGGAKVTSPDAEGSYK ALEKYSTDLTAAAKEGKLDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQGKKLIS LDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQIITFIDEIHTIVGAGAAEGSMDAGNMLKPMLARGELRLIGATTLDEY RENIEKDPALERRFQQVFVGEPSVEDTIAILRGLKQRYEAHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAA HLRMELDSSPEEIDELQRKVTRLEMEEMQLKKAEDPASKERLGKLQAELADTREKLSGLKARWDAEQAGHNKVGDLRAKL DDLRVQADKYTREGNLAEASKILYGEIPSIQKELAAAESADAESADASAANPADEPMVPDRVDADSVAEIVSDWTGIPVG RLMQGENEKLLHMEDYLGKRVIGQKEAIAAVSDAVRRSRAGISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAM VRIDMSEYMEKASVSRLIGAAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVLDDGRLTDGQGRTVDF KNTILIMTSNLGSQFLVNEDMDADAKKKAVMDAVHMNFKPEFLNRLDDIVMFHPLTREELGGIVDIQVAGVSQRLTDRRI TLDVTDSAREWLANTGYDPAYGARPLRRLVQTEVGDQLARMLLAGKVHDGDTVLVDQTGGEHLELSAWASDQIVSDNPDV SVDNVTEDK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 8e-102 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpA2 | YP_001955528.1 | ATP-binding subunit of Clp protease | VFG2084 | Protein | 4e-109 | 42 |
