Gene Information

Name : nrdA (BLD_1462)
Accession : YP_001955405.1
Strain : Bifidobacterium longum DJO10A
Genome accession: NC_010816
Putative virulence/resistance : Unknown
Product : ribonucleotide-diphosphate reductase subunit alpha
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0209
EC number : -
Position : 1697634 - 1699829 bp
Length : 2196 bp
Strand : +
Note : Catalyzes the rate-limiting step in dNTP synthesis

DNA sequence :
ATGACTGACCTCACCGCCACCGGCCTGCCGCTCGACAATACTGCCGACACCGCAGCGGAACAGTACGACCCGGCGCACGA
TTACCACGCGCTCAACGCGATGCTCAACCTCTATGACGCCGACGGCAAGATCCAGTTCGACAAAGACAAGGCCGCCGAAC
GCGAATACGTGACAGGGCACGTGGCCACCAACAGCAAGCGGTTCGCCTCCACCGCCGAGCGTCTCGAATACCTGATCAGC
AACCAGTACTACAACCCTGCGGTCTTCAACCAGTACTCCGCTGAATTCCTCGACCGCATCTACGAGCACGTGGAATCCGC
CGGCTTTGAGTTCGGCACTTTCCTTGGTGCGTTCAAGTTCTACACGTCCTACGCGCTCAAGACGTTCGATGGTCGCCTCT
ATCTTGAGGACTTCCCGCAGCGTTGCGCCGCTGTGGCCCTGGAGCTCGCCGCCGGCAATGAGCAGCAGGCCATCGAATAC
GCCGACGAAATGCTTGCCGGCCGCTTCCAGCCCGCCACCCCGACCTTCCTGAACCTCGGCAAGGCCCAGCGTGGCGAACC
GGTCAGCTGCTTCCTGGTGCGCATCGAAGACAACATGGAGTCGATTTCGCGCGGCATCAACGCGGCCCTCCAGCTCTCCA
AGCGCGGCGGTGGCGTGGCCCTGCTGCTGAGCAACCTGCGCGAGCTCGGCGCCCCGATCAAGCACATCGAGAACCAGTCC
AGCGGCGTGATTCCGGTCATGAAGCTGCTGGAGGACTCCTTCTCCTATGCCAACCAGCTCGGCGCACGTCAGGGCGCGGG
CGCGGTGTACCTCAACGCCCACCACCCTGATATCCTGCGCTTCCTGGATACCAAGCGAGAGAACGCGGACGAGAAGATCC
GCATCAAGTCGCTGGCTCTTGGCGTGGTGATTCCGGACATCACGTTCGAACTGGCCAAACAGAAGGCCCAGATGGCCCTG
TTCAGCCCGTACGACGTGGAGCGCGTGTACGGCAAGCCGTTCGCCGACATCTCCGTTACCGAGCATTATGACGAGATGGT
GGCCGACGACCGCATCAAGAAGACCTACATCGACGCCCGTAAGTTCTTCACCACCATCGCCGAACTGCAGTTCGAATCCG
GCTACCCGTACATCGTGTTCGAGGACACGGTCAACCGCGCGAACCCGATCGAAGGTCGCGTGACCATGTCCAACCTGTGC
TCGGAAATCCTGCAGGTTCAGGAGCCGAGCGCATACAACGAGGACCTCACGTATGCGCATGTCGGCCGCGACATCTCCTG
CAATCTGGGTTCGCTCAACATCGCTAAGGCGATGGATGGCGGCTTGGGCCACACGGTGGAGACGGCGATCCGCGCACTCA
CCTCGGTGGCCGAGCACACCAGCATCAACGCGGTGCCTTCGATTCGCCGCGCCAATGAGGAGGGCCACGCCATCGGTCTC
GGCCAGATGAACCTGCACGGCTTCCTGGCCCGCGAAGGCATCCAGTACGGTTCTGAAGAGGGCCTCGACTTCACCGACAT
GTACTTCATGACCGTGGCCTACCACGCCTACCGTGCCTCGCACGCGCTCGCCGTGGAGCATGGCCGCACGTTCGCCAGCT
TCGCTACGAGCGACTACGCCAAGCCGGCCGGCCAGGGCAACTACTTCGACAAGTACACCGATGGTCGTCGTTCGCTCACT
CCGCGCACCGAACGGGTCCGTGCGCTGTTCGAACAGTACGGCATCGCGATCCCGACTGCGGCCGACTGGGAGGCCCTGCG
CGACGCGATTCTGAAGGACGGCATCTACAACCAGAACCTGCAGGCCGTGCCGCCCACCGGCTCGATCTCGTACATCAACC
ATTCCACGAGCTCGATTCACCCGATCGCCTCCAAGATCGAGATTCGCAAGGAAGGCAAGATCGGGCGCGTGTACTACCCG
GCCGCCTACATGACCAACGACAACCTCGGGTACTACAAGGACGCCTACGAGATCGGCTGGAAGGCCATCGTCGACACGTA
CGCCGAGGCCACCCAGCACGTGGATCAGGGACTGTCGCTGACGCTGTTCTTCCCGGACACCGCCACCACCCGCGACCTCA
ATAAGGCCCAGATCTACGCCTGGCGCAAGGGCATCAAAACCCTCTACTACATCCGCATCCGCCAGCAAGCCCTGGAAGGC
ACTGAAGTCCAAGGCTGCGTCTCCTGCATGCTCTGA

Protein sequence :
MTDLTATGLPLDNTADTAAEQYDPAHDYHALNAMLNLYDADGKIQFDKDKAAEREYVTGHVATNSKRFASTAERLEYLIS
NQYYNPAVFNQYSAEFLDRIYEHVESAGFEFGTFLGAFKFYTSYALKTFDGRLYLEDFPQRCAAVALELAAGNEQQAIEY
ADEMLAGRFQPATPTFLNLGKAQRGEPVSCFLVRIEDNMESISRGINAALQLSKRGGGVALLLSNLRELGAPIKHIENQS
SGVIPVMKLLEDSFSYANQLGARQGAGAVYLNAHHPDILRFLDTKRENADEKIRIKSLALGVVIPDITFELAKQKAQMAL
FSPYDVERVYGKPFADISVTEHYDEMVADDRIKKTYIDARKFFTTIAELQFESGYPYIVFEDTVNRANPIEGRVTMSNLC
SEILQVQEPSAYNEDLTYAHVGRDISCNLGSLNIAKAMDGGLGHTVETAIRALTSVAEHTSINAVPSIRRANEEGHAIGL
GQMNLHGFLAREGIQYGSEEGLDFTDMYFMTVAYHAYRASHALAVEHGRTFASFATSDYAKPAGQGNYFDKYTDGRRSLT
PRTERVRALFEQYGIAIPTAADWEALRDAILKDGIYNQNLQAVPPTGSISYINHSTSSIHPIASKIEIRKEGKIGRVYYP
AAYMTNDNLGYYKDAYEIGWKAIVDTYAEATQHVDQGLSLTLFFPDTATTRDLNKAQIYAWRKGIKTLYYIRIRQQALEG
TEVQGCVSCML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 0.0 69