Gene Information

Name : Glov_0964 (Glov_0964)
Accession : YP_001951207.1
Strain : Geobacter lovleyi SZ
Genome accession: NC_010814
Putative virulence/resistance : Virulence
Product : lytic transglycosylase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0741
EC number : -
Position : 1003665 - 1004126 bp
Length : 462 bp
Strand : -
Note : PFAM: lytic transglycosylase catalytic; KEGG: ppd:Ppro_0193 lytic transglycosylase, catalytic

DNA sequence : 
ATGAAGGGCACCTGCAAACTGGCAACGATCCTGTCCTGCATCGCGATATGCCTTAATCCCGCCATGGGGTATGGCTTCTG
CTTTGAAGAAGCAGGCAGGATCTACAATCTGCCGCCAACCCTCTTGTTAAGCATTGCCAGACAGGAAAGCAACCTGAAGC
CTGATGCGATCAACCGGAATCTGAACGGCAGTTACGACTTTGGCCTGATGCAAATCAACTCAAGCTGGGCAAAACGGCTG
GGGCCTGAACTGTGGTCACAACTGGGTGATCCTTGCACAAATCTCAAGGTTGGTGCCTGGATCCTGCGCCAGTGCATCAA
TGACTACGGCTATGGCTGGAAGGCAGTAGGCTGTTACAACAGCAGAACACCGGGCAAAAATGAACGTTATGCCCAACGCA
TTGCAGCACAATTGGCAAACCACAGCATGCAGGCATCACTGACCCAGGATGGTGCACGATGA

Protein sequence : 
MKGTCKLATILSCIAICLNPAMGYGFCFEEAGRIYNLPPTLLLSIARQESNLKPDAINRNLNGSYDFGLMQINSSWAKRL
GPELWSQLGDPCTNLKVGAWILRQCINDYGYGWKAVGCYNSRTPGKNERYAQRIAAQLANHSMQASLTQDGAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpa2 AAF61278.1 Hpa2 precursor Virulence Hrp PAI Protein 1e-14 47
XC_3001 YP_244069.1 Hpa2 protein Virulence Hrp PAI Protein 5e-16 45
hpa2 NP_636615.1 Hpa2 protein Virulence Hrp PAI Protein 5e-16 45
hpaH AAL78295.1 HpaH precursor Virulence Hrp PAI Protein 1e-14 45
hpaH YP_362172.1 transglycosylase HpaH Virulence Hrp PAI Protein 2e-14 45
iagB NP_461798.1 invasion protein precursor Virulence SPI-1 Protein 3e-14 45
iagB YP_217796.1 cell invasion protein Virulence SPI-1 Protein 3e-14 45
iagB NP_806480.1 cell invasion protein Virulence SPI-1 Protein 5e-14 44
iagB NP_457271.1 cell invasion protein Virulence SPI-1 Protein 5e-14 44
hpa2 NP_640772.1 Hpa2 protein Virulence Hrp PAI Protein 3e-15 43
etgA AFO66404.1 putative lytic transglycosylase Not tested SESS LEE Protein 4e-13 43
etgA AFO66324.1 putative lytic transglycosylase Not tested SESS LEE Protein 4e-13 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Glov_0964 YP_001951207.1 lytic transglycosylase VFG0539 Protein 8e-15 45