Gene Information

Name : Glov_0737 (Glov_0737)
Accession : YP_001950983.1
Strain : Geobacter lovleyi SZ
Genome accession: NC_010814
Putative virulence/resistance : Virulence
Product : sigma-54 specific transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG3829
EC number : -
Position : 748822 - 750048 bp
Length : 1227 bp
Strand : -
Note : PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: lip:LI1151 transcriptional regulator containing GAF, AAA-type ATPase, and DNA bindin

DNA sequence : 
ATGCACGACACTCCACTCAACCAGCTGCTTGATCGCCTGATCGCCGTGGCCGAAGACCTCTCCATGGGGCGTTACGGTAA
ATACAACGACATTTTCGAACTGACCAAAAGCGGCCAGTACCCCCCCCTGATCGCCCGCTTTGCCGAGTCGTTCGGGATGA
TGGCGGTCAAGGTCGAGGCACGGGAATACCGGCTGGAGCAGATCATCGAAGAGCTTCGGGCAACCGAACTCCAACTGCGC
ACAGCCCGGGAACAGCTGGCCCGCGAGAACAGCAGCCTCAAAAAGAACCTGCGCCGTTCCTTTCCCTTTTCCTCCATCCT
CGGCACCAGCCCCCAGATCAGGGAGCTGATCGGCAAGGCAGAACGGATAGCCGATTCCCGCCTGTCGGTGATCATCACCG
GCGAGACCGGCACCGGCAAGGAACTGTTCGCCAAGGCGATCCACTTCAACAGCCCCCGCAGCGCCAAGCCGTTTGTGGCA
GTCAACTGTTCCGCCATCCCGGAGACCATCTTTGAAAGCGAAATGTTCGGCATTGAAAAGGGGGTGGCCACCGGGGTCGA
GGCCCGCATCGGCAAGATCCAGCAGGCGCAAGGCGGCACCCTGTTTCTGGACGAGGTGGGGGAGATGCCGTTGCAACTGC
AGGCCAAACTTTTGCGGGTGCTGGAAGAGCGGACCCTGGAACGGGTCGGCAGCCGGACCGCCATCCCGGTTGATCTGAGG
ATCATTGCCGCTACCAACCGCGATTTGACCAAAGAGATTGCCAAAGGCAGCTTCCGGGAGGATCTCTACTACCGCCTGAA
CGGCGTTACCCTGCGGATTCCGCCCCTGCGGGAACGTAAAGGCGACATTGACCTGATTGCACGCCAATTTCTGGAGAAGT
GGGGCCGCAGTTGCGGCAGGCCGCCGATGCGGATTGCCAAAGAGGCGCTGGAACGGCTGCGCGGCTATACCTGGCCCGGC
AACGTGCGTGAACTGGATAACGAAATTGAGCGGGCTGTGGCACTGGCCTACGGCGACACCATTACCATGACCGACCTTTC
TGATCCGCTGCAGCAGCAGACCACTCTACCAGCAGCCGGGGGAAAATCACTGCTGAAGGATTCAGAGAAACAGCTGATCG
AGCAGGCGCTGAAAGAGGCCAAAGGCAACAAGACCCAGGCAGCAGAACGGCTGGGAATGAGCCGCGAGGGGCTGCGCAAG
AAGCTGAAGCGGCTGGGCATGGAGTAG

Protein sequence : 
MHDTPLNQLLDRLIAVAEDLSMGRYGKYNDIFELTKSGQYPPLIARFAESFGMMAVKVEAREYRLEQIIEELRATELQLR
TAREQLARENSSLKKNLRRSFPFSSILGTSPQIRELIGKAERIADSRLSVIITGETGTGKELFAKAIHFNSPRSAKPFVA
VNCSAIPETIFESEMFGIEKGVATGVEARIGKIQQAQGGTLFLDEVGEMPLQLQAKLLRVLEERTLERVGSRTAIPVDLR
IIAATNRDLTKEIAKGSFREDLYYRLNGVTLRIPPLRERKGDIDLIARQFLEKWGRSCGRPPMRIAKEALERLRGYTWPG
NVRELDNEIERAVALAYGDTITMTDLSDPLQQQTTLPAAGGKSLLKDSEKQLIEQALKEAKGNKTQAAERLGMSREGLRK
KLKRLGME

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpS NP_791207.1 type III transcriptional regulator HrpS Virulence Hrp PAI Protein 1e-34 42
hrpS AAC35800.1 transcriptional regulator Virulence Hrp PAI Protein 4e-36 42
hrpS AAT96161.1 HrpS Virulence T-PAI Protein 9e-36 41
hrpS AAT96215.1 HrpS Virulence T-PAI Protein 9e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Glov_0737 YP_001950983.1 sigma-54 specific transcriptional regulator BAC0089 Protein 2e-61 44
Glov_0737 YP_001950983.1 sigma-54 specific transcriptional regulator BAC0022 Protein 9e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Glov_0737 YP_001950983.1 sigma-54 specific transcriptional regulator VFG1214 Protein 9e-56 43