Gene Information

Name : Glov_0588 (Glov_0588)
Accession : YP_001950835.1
Strain : Geobacter lovleyi SZ
Genome accession: NC_010814
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 577424 - 578104 bp
Length : 681 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: gur:Gura_1572 two component transcriptional regulator, winged helix family

DNA sequence :
ATGAAAAAAGTCTTGATAGTTGAGGATGAACGAGATCTGGCGGAGCTGCTGGCCTATAACCTTGAAAAAGAGGGTTATCA
GGCCCTGGTGACCGGCACCGGGGTGGAAGGGCTGGAGACGGCCCGCCGCGAGTTGCCGGACCTGATCCTGCTTGATCTGA
TGTTGCCCGGCATGATGGGAACCGAGGTCTGCTCTGCCCTGCGGCACAGCGACAAGACCCGCGGCATACCGGTGCTGATG
CTGACGGCTCGCGGTGATGAAATTGACCGTGTGGTGGGGTTTGAGATGGGGGCGGACGATTACATTGTTAAGCCGTTCTC
TATGCGGGAGTTAATGTTGCGGATTCGTGCCATTCTGCGGCGCAGCAGCCAGGAACCGGATACGACTGAGCGTCAGATCA
CCATGGGGACGATTGTGATTGACTGTGCCAGCCACCGGGTCACCGTAGCCGGCAGCGAGATCGAGCTGACCAGCACGGAA
TACAAGCTGCTGCTCTATCTGGCTGAACATGGCGGCCGGGTCATGAAGCGTGAACTGCTGCTGCAGGATGTCTGGGGCTA
TAATTTTGTGGGCGACACCCGTACGGTCGATACCCATGTGACCCGTTTACGTAACAAGCTGGGGGATGCCGGCGAGATGA
TCAAGACCGTGCGTGGCTTTGGCTACAAGCTGGAGGAATAA

Protein sequence :
MKKVLIVEDERDLAELLAYNLEKEGYQALVTGTGVEGLETARRELPDLILLDLMLPGMMGTEVCSALRHSDKTRGIPVLM
LTARGDEIDRVVGFEMGADDYIVKPFSMRELMLRIRAILRRSSQEPDTTERQITMGTIVIDCASHRVTVAGSEIELTSTE
YKLLLYLAEHGGRVMKRELLLQDVWGYNFVGDTRTVDTHVTRLRNKLGDAGEMIKTVRGFGYKLEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator NC_002952.2859905.p0 Protein 3e-45 50
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator NC_013450.8614421.p0 Protein 3e-45 50
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator NC_007793.3914279.p0 Protein 3e-45 50
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator NC_003923.1003749.p0 Protein 3e-45 50
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator NC_002745.1124361.p0 Protein 3e-45 50
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator NC_009782.5559369.p0 Protein 3e-45 50
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator NC_002951.3237708.p0 Protein 3e-45 50
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator NC_007622.3794472.p0 Protein 3e-45 50
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator NC_002758.1121668.p0 Protein 3e-45 50
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator NC_009641.5332272.p0 Protein 3e-45 50
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator NC_003923.1003417.p0 Protein 2e-34 48
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator NC_013450.8614146.p0 Protein 2e-34 48
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator NC_002951.3238224.p0 Protein 2e-34 48
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator NC_007793.3914065.p0 Protein 2e-34 48
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator NC_002758.1121390.p0 Protein 2e-34 48
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator NC_010079.5776364.p0 Protein 2e-34 48
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator NC_002952.2859858.p0 Protein 2e-34 48
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator NC_007622.3794948.p0 Protein 2e-34 48
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator NC_012469.1.7685629. Protein 7e-39 46
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator HE999704.1.gene2815. Protein 2e-40 46
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator AE000516.2.gene3505. Protein 4e-33 46
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator AE015929.1.gene1106. Protein 9e-29 45
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator BAC0125 Protein 4e-25 44
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator HE999704.1.gene1528. Protein 6e-28 43
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator CP000675.2.gene1535. Protein 2e-32 43
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator AE016830.1.gene1681. Protein 3e-39 43
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator CP000034.1.gene3834. Protein 9e-31 43
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator NC_002695.1.915041.p Protein 9e-31 43
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator BAC0197 Protein 2e-24 43
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator CP001918.1.gene5135. Protein 1e-25 43
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator BAC0308 Protein 1e-27 42
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator NC_012469.1.7686381. Protein 2e-38 42
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator BAC0111 Protein 2e-30 42
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator CP001138.1.gene4273. Protein 2e-30 42
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator BAC0083 Protein 4e-25 41
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator NC_008702.1.4607594. Protein 7e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator VFG0596 Protein 8e-24 41
Glov_0588 YP_001950835.1 winged helix family two component transcriptional regulator VFG1389 Protein 6e-30 41