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Name : Glov_0479 (Glov_0479) Accession : YP_001950727.1 Strain : Geobacter lovleyi SZ Genome accession: NC_010814 Putative virulence/resistance : Virulence Product : NAD-dependent epimerase/dehydratase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 454533 - 455546 bp Length : 1014 bp Strand : - Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: gsu:GSU2241 capsula DNA sequence : ATGCGGATTCTTGTTACCGGCGCAGCCGGATTCATCGGTTTTCACCTCTGCCGGCGCCTGCTGGCACGGGGCGATGCGGT CCTGGGGCTGGACAATCTGAATAGCTACTATGATGTCAGCCTGAAACAGGCCCGGCTTGCACAGCTACAGCCCCACCCCG GCTTCAGCTTTGTACAGGCAGACCTGGCAGACCGTCCTGCAATGGAACAACTGTTCAGCGTGGAGCAGTTCGATATTGTT ATTCATCTGGCAGCCCAGGCCGGTGTCCGATACTCGCTTGAGAACCCCCATGCCTATGTTGACAGCAACCTGACCGGCTT TATGAACATCCTGGAAGGCTGCCGTCATACTGGCGTCAAACATCTGGTCTTTGCCTCTTCAAGTTCGGTCTATGGCGCCA ACACCGCCATCCCCTTTTCCATTCACCAGAATGTCGATCACCCTGTTTCTCTCTATGCGGCCACCAAAAAGGCCAATGAG CTGATGGCCCATAGCTACGCAAGCCTCTTCAATCTGCCGGTTACCGGCTTGCGGCTGTTCACGGTTTACGGCCCCTGGGG CAGACCGGATATGGCCTATTTTTCCTTTACCAGGGCCATCCTGGAAGGCAGACCGATCAATATCTTCAACCGGGGCAGGA TGCAGCGGGATTTTACCTATGTGGATGACATCGTAGAGGGTATTGTCCGCATAGCTGAAAAACCTGCAGAGAAAAACCCA ACCTGGTCCGGTACGCAGCCTGATCCCGGCACCAGCTTTGCCCCCTATCGAATCTACAACATCGGCAACAACAAACCGGT TGAGCTGTTGCAGTTCATAGAGATTCTGGAACAACAGCTGGGGATAACCGCGCAGAAAAACTTTCTACCGATGCAGGCTG GCGACGTGCCTGCCACCTTTGCCGATATCGATGAGCTGGCTGCCGCGACCGGTTTCAGGCCTGCCACCTCGCTGGAGGAC GGTATTGCACGCTTTGTTGCATGGTTCCGCTCGTACTACAGCCATCCCGCATAA Protein sequence : MRILVTGAAGFIGFHLCRRLLARGDAVLGLDNLNSYYDVSLKQARLAQLQPHPGFSFVQADLADRPAMEQLFSVEQFDIV IHLAAQAGVRYSLENPHAYVDSNLTGFMNILEGCRHTGVKHLVFASSSSVYGANTAIPFSIHQNVDHPVSLYAATKKANE LMAHSYASLFNLPVTGLRLFTVYGPWGRPDMAYFSFTRAILEGRPINIFNRGRMQRDFTYVDDIVEGIVRIAEKPAEKNP TWSGTQPDPGTSFAPYRIYNIGNNKPVELLQFIEILEQQLGITAQKNFLPMQAGDVPATFADIDELAAATGFRPATSLED GIARFVAWFRSYYSHPA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-95 | 56 |
