Gene Information

Name : Glov_3301 (Glov_3301)
Accession : YP_001953527.1
Strain : Geobacter lovleyi SZ
Genome accession: NC_010814
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.14
Position : 3531727 - 3533025 bp
Length : 1299 bp
Strand : -
Note : KEGG: ppd:Ppro_3429 flagellar protein export ATPase FliI; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; SMART: ATPase AAA

DNA sequence :
ATGGGCAGGTACCTGCGGGCAGTGGAATCGGTTAACCCGATCCGCTTGCATGGCAAGGTAACCCAGGTTGTCGGGTTGGT
GATTGAGGGCTACTGTCCGGATACCTCGGTTGGAGCGATATGTGAAATTCGTCCCAAGGATGGAGTTCCGATTCCCGCCG
AGGTGGTGGGTTTTCGCGACAACAAGACCCTTTTAATGCCGTTGGGGGACCTGCGAGGGGTGGGGCTGGACAGCCTGATC
GCGGTGCGCCGTGACAAGGCAACCCTCAGGGTGGGGCCTGGGTTGCTGGGACGGGTCATCGACGGACTGGGGAATCCGAT
AGACGACAAAGGGCCGCTGCATCTGGATGAGGAATATCCGATTTATGCGGCACCGGTTAATCCCATGAAGCGTCCACCGA
TCAGGCGTCCCCTGGATCTGGGCATCCGTTCAATCAATGGCCTTTTAACGTGTGGCCAGGGACAGCGGGTTGGCATCATG
GCCGGTTCCGGCGTCGGGAAATCAACCCTCCTGGGTATGATTGCGCGCTACACTGAGGCCGATGTCAATGTGATCGCCCT
GATTGGCGAACGAGGGCGGGAACTGCGGGAGTTCGTAGAAAAAGATCTGCAGGAACAGGGCTTGCACAAGTCGGTAGTGG
TCGTAGCGACCTCTGACCAACCGCCGCTGGTCAGGATGCGCGGGGCCTATCTGGCCACCACCATTGCGGAATACTTCAAA
GATCAAGGCAAAAAAGTATTGATGATGATGGACTCTGCCACCCGCTTTGCAATGGCGATGCGTGAGGTGGGTCTTGCAAT
TGGAGAACCTCCCACCACCAAAGGATACACCCCCTCCGTCTTTGCTGCCCTGCCGAAATTGCTTGAGAGAACCGGCAACT
TTCCCGAAGGAAGTATTACCGGACTCTATACTGTGCTGGTTGAAGGGGACGACTTTAATGAGCCGATCTCGGATGCCATG
CGTAGTATTCTTGACGGTCATATTGTCCTTTCAAGGGATCTGGCGGCCCGTAACATCTATCCGCCGATTGACATCATGGC
CAGTGCGAGCAGGGTCATGGCAGATGTCGCTGATGAACGGCACCGGAAGCTGGCTGGGCAGTTTAAAGAGACTCTGGCAA
CCTACCGCCAGTCTGAAGACCTTATCAATATTGGAGCCTATAAAGCAGGCAGCAACCCCGGGATTGACCAGGCTATCCGT
AAGATCGATGCCATGACTGCCTATCAGAAGCAGGCGGTTGCCGATCCGGCAACCCTGGCTGACTCCGTTGATGGACTTCA
ACGGATTTTTGAGAGTTAG

Protein sequence :
MGRYLRAVESVNPIRLHGKVTQVVGLVIEGYCPDTSVGAICEIRPKDGVPIPAEVVGFRDNKTLLMPLGDLRGVGLDSLI
AVRRDKATLRVGPGLLGRVIDGLGNPIDDKGPLHLDEEYPIYAAPVNPMKRPPIRRPLDLGIRSINGLLTCGQGQRVGIM
AGSGVGKSTLLGMIARYTEADVNVIALIGERGRELREFVEKDLQEQGLHKSVVVVATSDQPPLVRMRGAYLATTIAEYFK
DQGKKVLMMMDSATRFAMAMREVGLAIGEPPTTKGYTPSVFAALPKLLERTGNFPEGSITGLYTVLVEGDDFNEPISDAM
RSILDGHIVLSRDLAARNIYPPIDIMASASRVMADVADERHRKLAGQFKETLATYRQSEDLINIGAYKAGSNPGIDQAIR
KIDAMTAYQKQAVADPATLADSVDGLQRIFES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscN AAO18044.1 LscN Virulence TTSS locus Protein 1e-103 51
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-92 49
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-92 49
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 2e-92 48
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-91 48
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 6e-92 48
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-92 48
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 4e-92 48
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 3e-92 48
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 3e-92 48
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 1e-87 48
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 7e-88 48
escN CAI43874.1 EscN protein Virulence LEE Protein 8e-88 48
escN CAC81862.1 EscN protein Virulence LEE II Protein 6e-88 48
escN AAK26715.1 EscN Virulence LEE Protein 2e-88 48
unnamed AAL06369.1 EscN Virulence LEE Protein 7e-87 48
escN AAL57542.1 EscN Virulence LEE Protein 2e-88 48
escN AAC38383.1 EscN Virulence LEE Protein 2e-87 48
escN NP_290268.1 hypothetical protein Virulence LEE Protein 2e-87 48
ECs4568 NP_312595.1 EscN Virulence LEE Protein 2e-87 48
escN YP_003236088.1 translocator EscN Virulence LEE Protein 2e-87 48
escN AAC31513.1 L0034 Virulence LEE Protein 1e-87 48
escN YP_003223475.1 translocator EscN Virulence LEE Protein 1e-87 48
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 2e-87 47
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 2e-87 47
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 4e-82 46
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 4e-82 46
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 7e-83 46
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-82 46
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-82 46
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 2e-73 45
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 1e-80 44
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 3e-69 44
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 5e-76 44
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 1e-82 44
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 3e-78 44
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 7e-78 44
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 5e-78 44
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 1e-75 43
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 9e-76 43
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 5e-76 43
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 3e-71 43
invC AAS66861.1 InvC Not tested SSR-2 Protein 7e-72 42
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 2e-67 42
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 2e-67 42
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 2e-67 42
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 2e-67 42
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 8e-70 42
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 8e-70 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Glov_3301 YP_001953527.1 flagellar protein export ATPase FliI VFG2144 Protein 2e-105 53
Glov_3301 YP_001953527.1 flagellar protein export ATPase FliI VFG0048 Protein 5e-107 52
Glov_3301 YP_001953527.1 flagellar protein export ATPase FliI VFG0192 Protein 7e-108 51
Glov_3301 YP_001953527.1 flagellar protein export ATPase FliI VFG1254 Protein 4e-97 51
Glov_3301 YP_001953527.1 flagellar protein export ATPase FliI VFG2499 Protein 5e-93 51
Glov_3301 YP_001953527.1 flagellar protein export ATPase FliI VFG0390 Protein 3e-102 50
Glov_3301 YP_001953527.1 flagellar protein export ATPase FliI VFG0812 Protein 7e-88 48
Glov_3301 YP_001953527.1 flagellar protein export ATPase FliI VFG0730 Protein 1e-87 48
Glov_3301 YP_001953527.1 flagellar protein export ATPase FliI VFG2331 Protein 2e-86 47
Glov_3301 YP_001953527.1 flagellar protein export ATPase FliI VFG0515 Protein 4e-83 46
Glov_3301 YP_001953527.1 flagellar protein export ATPase FliI VFG1008 Protein 3e-73 44
Glov_3301 YP_001953527.1 flagellar protein export ATPase FliI VFG0555 Protein 1e-67 42
Glov_3301 YP_001953527.1 flagellar protein export ATPase FliI VFG1778 Protein 2e-67 42
Glov_3301 YP_001953527.1 flagellar protein export ATPase FliI VFG2459 Protein 6e-75 41