Gene Information

Name : Glov_0248 (Glov_0248)
Accession : YP_001950497.1
Strain : Geobacter lovleyi SZ
Genome accession: NC_010814
Putative virulence/resistance : Virulence
Product : lytic transglycosylase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0741
EC number : -
Position : 227290 - 227796 bp
Length : 507 bp
Strand : +
Note : PFAM: lytic transglycosylase catalytic; KEGG: ppd:Ppro_0193 lytic transglycosylase, catalytic

DNA sequence : 
ATGTGTCGATTACCAGGCATCTGCCTGCTCATGATCAGCCTTGTCAGTTTGCCGATTCAGGCCAAAGCTTTCTGCTTCGA
GGAGGCCGGGAGTCAATACGGCATATCGCCACAGCTGCTCTGGAGCATTGCCAAGACGGAGAGCAACTTCAACCCCCGTG
CGATCAATCGGAACAGTAACGGAACCTACGATTACGGTCTGATGCAGATCAATTCAAGTTGGGCCAAGAGACTTGGCAAA
ACATGGAATGAACTGGGAGAGCCATGCACGAATGTAAAGGTGGGAGCCTGGGTGCTGGCCCAATGTATCCAGGATTATGG
CTACACTTGGCGGGCTGTCGGTTGTTACAACTCGCGCACCCCGTCGAAGGGGGACCGATACGCCGGGAAAGTGTATCGCA
TCCTCGCTGAGCATACAAAGCCACAGGCGACGACGCTTATCGCAGCTATCAGCACACCTAGAATCGATTCACCATGGGAT
GAGGTGTTCGGCAATGCTGTCCGCTGA

Protein sequence : 
MCRLPGICLLMISLVSLPIQAKAFCFEEAGSQYGISPQLLWSIAKTESNFNPRAINRNSNGTYDYGLMQINSSWAKRLGK
TWNELGEPCTNVKVGAWVLAQCIQDYGYTWRAVGCYNSRTPSKGDRYAGKVYRILAEHTKPQATTLIAAISTPRIDSPWD
EVFGNAVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ltgX AAW83060.1 LtgX Not tested GGI Protein 3e-14 44
iagB YP_217796.1 cell invasion protein Virulence SPI-1 Protein 2e-13 43
iagB NP_461798.1 invasion protein precursor Virulence SPI-1 Protein 2e-13 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Glov_0248 YP_001950497.1 lytic transglycosylase VFG0539 Protein 7e-14 43