Gene Information

Name : Glov_2249 (Glov_2249)
Accession : YP_001952485.1
Strain : Geobacter lovleyi SZ
Genome accession: NC_010814
Putative virulence/resistance : Unknown
Product : TetR family transcriptional regulator
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 2399904 - 2400881 bp
Length : 978 bp
Strand : -
Note : TIGRFAM: integrase; PFAM: integrase; KEGG: gme:Gmet_3006 integrase

DNA sequence : 
ATGCAAAATCAATCTGCCAAGCCGAAGTTGCTGGACCAGTTGCGTGATCGTATCAGGTTGAAACATTACAGCCGCCGGAC
TGAGGATGTGTACCTTGACTGGGCAAAGCGTTACATACTGTATCACAATAAACGGCACCCGCAAGAGATGGGCAAGAAAG
AAATTGAGGGGTTTTTAACGTACCTGGCGACTGAGCGGCAGGTGGCGGCTGCCACCCAGAATCAGGCCAAGGCAGCTCTG
CAGTTTCTGTATAAAGAGGTGCTTGAAATTCAGTTGCCCTGGCTGGATGAGGTGGAACAGGCCAAAAAGCCGAAGCGGTT
GCCGGTGGTGCTGACCGAGAAAGAGGTGCATTCTCTGCTGGCCCATGTGCCACAGGCCTATGCTTTGTTGGCCCGTCTGA
TGTACGGTACCGGTATGCGTTTGCTGGAGGGGTTGCGGCTGCGTGTGCAGGATCTTGATTTTGAAAGAGCCGAGCTGCTG
ATTCGGGAGGGTAAGGGGGGTAAAGACCGGGTGACCATGCTGCCACAGTCATTGCTCAAGCCGTTGCAGGAACATCTGAA
ACAGGTAAAGCAGGCGCATGAGCAGGATCTTTTAAAGGGGTACGGTGAGGTCTGGCTGTCTGAGAGTGTTGCCCGCAAGT
ATCCCAATGCCGGGCGGGAGTGGGTCTGGCAGTATGTCTTTCCGTCTGCGCGGTTATCGGTTGATCCCCGTTCCGGTGTG
ACCAGACGGCATCATCTGGATGAAAAGGGGCTGCAGCGGGCGATCAAGCAGGCTGCGGTTGATGCGGGGTTGACCAAGAA
TGTGACGCCCCATACCCTGCGGCATTCTTTTGCGACCCATCTGCTGCAGGCGGGGTATGATATCCGTACCGTGCAGGAGT
TGCTGGGACACAAGGATGTGCAGACCACGATGATTTATACCCATGTGCTGAACAAGGGCGGGATGGGGGTGATGTCGCCG
CTGGACCGGCTTGCCTAG

Protein sequence : 
MQNQSAKPKLLDQLRDRIRLKHYSRRTEDVYLDWAKRYILYHNKRHPQEMGKKEIEGFLTYLATERQVAAATQNQAKAAL
QFLYKEVLEIQLPWLDEVEQAKKPKRLPVVLTEKEVHSLLAHVPQAYALLARLMYGTGMRLLEGLRLRVQDLDFERAELL
IREGKGGKDRVTMLPQSLLKPLQEHLKQVKQAHEQDLLKGYGEVWLSESVARKYPNAGREWVWQYVFPSARLSVDPRSGV
TRRHHLDEKGLQRAIKQAAVDAGLTKNVTPHTLRHSFATHLLQAGYDIRTVQELLGHKDVQTTMIYTHVLNKGGMGVMSP
LDRLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
intI1 AFL65913.1 class 1 integrase Not tested SGI1-J6 Protein 2e-61 55
int1 YP_005160012.1 integrase Not tested Not named Protein 2e-64 54
intI1 AGK07013.1 IntI1 integrase Not tested SGI1 Protein 2e-78 54
intI1 CAB46685.1 DNA integrase Not tested Not named Protein 1e-77 54
unnamed AAL08437.1 Tn21 integrase IntI1 Not tested SRL Protein 3e-77 54
intI1 AGK07071.1 IntI1 integrase Not tested SGI1 Protein 2e-78 54
unnamed ACF06155.1 class 1 integrase Not tested Tn5036-like Protein 4e-78 54
intI1 AAK02045.1 integrase Not tested SGI1 Protein 1e-77 54
intI1 AFV53119.1 IntI1 integrase Not tested AbGRI2-1 Protein 2e-78 54
intI1 AGK07098.1 IntI1 integrase Not tested SGI1 Protein 4e-78 54
intI1 ABZ01842.1 IntI1 Not tested SGI2 Protein 1e-77 54
EC042_4092 YP_006098375.1 integrase Not tested Tn2411 Protein 5e-78 54
intI1 AGK36642.1 IntI1 integrase Not tested AbaR26 Protein 2e-78 54
intI1 ABB48427.1 IntI1 integrase Not tested SGI1 Protein 2e-78 54
intI CAJ77028.1 Integrase Not tested AbaR1 Protein 1e-77 54
intI YP_001844881.1 integrase Not tested AbaR20 Protein 3e-78 54
intI CAJ77082.1 Integrase Not tested AbaR1 Protein 2e-78 54
intI1 ACY75520.1 integrase Not tested Tn6060 Protein 1e-77 54
intI1 YP_005797130.1 integrase Not tested AbaR4e Protein 3e-78 54
intI1 AGF35060.1 IntI1 integrase Not tested SGI1 Protein 2e-78 54
intI1 ACY75535.1 integrase Not tested Tn6060 Protein 1e-77 54
intI1 YP_005797145.1 integrase Not tested AbaR4e Protein 3e-78 54
intI1 AGK06930.1 IntI1 integrase Not tested SGI1 Protein 2e-78 54
intI1 AGF34986.1 IntI1 integrase Not tested SGI1 Protein 1e-77 54
intI1 ACN81019.1 IntI1 integrase Not tested AbaR5 Protein 3e-78 54
intI1 AGK06967.1 IntI1 integrase Not tested SGI1 Protein 2e-78 54
intI1 AGF35026.1 IntI1 integrase Not tested SGI1 Protein 1e-77 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Glov_2249 YP_001952485.1 TetR family transcriptional regulator VFG1028 Protein 2e-77 54