Gene Information

Name : Glov_0226 (Glov_0226)
Accession : YP_001950477.1
Strain : Geobacter lovleyi SZ
Genome accession: NC_010814
Putative virulence/resistance : Unknown
Product : transposase IS204/IS1001/IS1096/IS1165 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3464
EC number : -
Position : 208817 - 210133 bp
Length : 1317 bp
Strand : -
Note : PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: drm:Dred_0866 transposase, IS204/IS1001/IS1096/IS1165 family protein

DNA sequence :
ATGCTCAGCATCCTCAACCTCCGCCGATATCACGTTCTCTCTACCAGAGAAGACACTCACGATTATCACATTGCTGCTGA
AACAGCCAATCCACCGACTCAATGTATCCACTGCGGTTCTGATAATCTGGTCGGAGGTGGCCGGCAAGAGATAATGATAC
GAGACCATCTCGTTCATGCGAAGCGGGTTGCGATTTACGTCTCCGCACGTCGTTTGCATTGCCGTGAATGCAATAAGACC
TTTACCGAATCACTTCCCGATGTTGCTGAAGGGAAGCGCATGACTGCACGGCTTTATCAGTGGATTGCAGAACAGTCGCT
CAAGCGAACATTCACCAGCATTGCCGAGGACGTTGGATGTACTGAGGGTACTATTCGATCAGTCTTCCGGGAGTATATTG
CAAAGCTCGAAGAGACGGTGATTTTCGAAACACCCGAATGGATGGGAATTGACGAAATCCATATCATTAAAAAGCCCCGG
CTGGTCGTTTCGAACATTGAACATAACAAAGTCGTCAATATCCTGTCGGACAGGAATAAGACTACTGTTTCGAATTACCT
CTTCAGACTCCCTAATCGAAACTCCATCAAATGCGTTACGATGGATATGTGGTTGCCATACAAGAATGCTGTCAACGCGG
TATTGCCCTCTGCATTTATCGTGGTGGACAAGTTCCACGTAGTGAGGATGGCAAACCAATCACTTGAAGTGGTACGAAAA
TCCATTCGAGAAGACCTCACCACGAAGCAACGGCGAGGCCTTATGCATGATCGCTTTTTTCTCCTGAAGCGAGAGTCGGA
ACTGAAGCCATTTGAACGGCTGACATTAGAATCGTGGACAAGAAACTTCCCTGTTCTAGGGGAGGCCTACCAGGCTAAAG
AGGATTTTTTAAGGATCTACGACCATCTGGACATTTCCGACGCTCTGGCGGCTTATGATACATGGCAAAGTGGACTTTCT
CTTGGAGTGGCTACGGCATTCAAACCGCTGATTACGGCAGTGAAGAATTGGCGGACTGAGATATTTGCTTACTTTGATCA
CCCTGTAACCAATGCCTACACTGAAAGCTTGAACAACCTTATCCGGTGCGTGAACCGCATAGGTCGGGGCTATTCGTTTG
ATGCTCTCAGGGCAAAGATCCTTTTCACCAAAGGCGCTCACAAGGTCATCCAGCCAACACCTAAATTCGAACGGCGTGAC
CCGTACGCCATAGGCCGAATGACTCACTACACACCCACAGTATCAGCAGCAAGAACCATCAACTATGGTGTGGACACATC
AACACTTTTACGTCTGCTGGAAGAGAGTAAGGTCTAA

Protein sequence :
MLSILNLRRYHVLSTREDTHDYHIAAETANPPTQCIHCGSDNLVGGGRQEIMIRDHLVHAKRVAIYVSARRLHCRECNKT
FTESLPDVAEGKRMTARLYQWIAEQSLKRTFTSIAEDVGCTEGTIRSVFREYIAKLEETVIFETPEWMGIDEIHIIKKPR
LVVSNIEHNKVVNILSDRNKTTVSNYLFRLPNRNSIKCVTMDMWLPYKNAVNAVLPSAFIVVDKFHVVRMANQSLEVVRK
SIREDLTTKQRRGLMHDRFFLLKRESELKPFERLTLESWTRNFPVLGEAYQAKEDFLRIYDHLDISDALAAYDTWQSGLS
LGVATAFKPLITAVKNWRTEIFAYFDHPVTNAYTESLNNLIRCVNRIGRGYSFDALRAKILFTKGAHKVIQPTPKFERRD
PYAIGRMTHYTPTVSAARTINYGVDTSTLLRLLEESKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Pmu_03510 YP_005176249.1 transposase tnpA Not tested ICEPmu1 Protein 5e-107 51
tnpA ACN81032.1 transposase of ISL3 family Not tested AbaR5 Protein 7e-72 41
tnpA ACS32044.1 transposase of ISL3 family Not tested AbaR5 Protein 7e-72 41
tnpA AGK36656.1 transposase of ISL3 family Not tested AbaR26 Protein 6e-72 41
1_52 CAJ77024.1 Transposase Not tested AbaR1 Protein 5e-72 41
1_386 CAJ77097.1 Transposase Not tested AbaR1 Protein 5e-72 41
tpnA ADI24144.1 transposase Not tested AbaR1 Protein 5e-72 41
tpnA ADZ05772.1 transposase Not tested AbaR11 Protein 5e-72 41