Gene Information

Name : Glov_2201 (Glov_2201)
Accession : YP_001952437.1
Strain : Geobacter lovleyi SZ
Genome accession: NC_010814
Putative virulence/resistance : Virulence
Product : N-6 DNA methylase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0286
EC number : -
Position : 2348512 - 2350848 bp
Length : 2337 bp
Strand : -
Note : PFAM: N-6 DNA methylase; KEGG: mca:MCA0278 type I restriction-modification system, M subunit

DNA sequence :
ATGGATCAAGCCACCCACAACAAGATTGTCTCCTTTATCTGGGGCATTGCCGATGATGTGCTACGCGACCTGTTCAAGCG
GGGCAAGTACCCTGATGTAATCCTGCCGATGTGTGTACTGCGTCGTCTGGATGCCGTACTGGAACCAACCAAGCAGGCAG
TACTGGATACCAAACAGATGCTGGATGATGCCGGGATTACCGAGCAGAAGGCAGCCCTGTGCGAGGCAGCCGGACAGGCT
TTCTATAACACCTCCAGATTCACCCTGCGTGATCTGCGCTCCCGTGCCAACCAACAGCAACTCAAACTTGATTTTGAGGA
TTATCTGGACGGGTTTTCGCAGAACGTCCAGGATATTCTGGAAAACTTCAAGTTTCGCAACCAGATCAGCACTCTGTCCA
AGGCCGATGCCATCGGTACCCTGATTGAAAAGTTCCTTGATCCCGACATCAACGTAAGTCCCAATCCGGTGCTGAACAGC
GACGGCTCGGTACGGCTTCCAGCCATGGATAACCACTCCATGGGGACGGTCTTTGAAGAGCTGGTCCGTAAGTTCAATGA
GGACAACAACGAAGAGGCCGGTGAACACTGGACACCCCGTGATGCCGTCAAGTTGATGGCTCGCTTGATCTTCCTGCCGA
TTGCCGATCAGGTGCAGTCTGGTTCGTACCAGCTCTATGACGGGGCCTGCGGTACCGGCGGCATGCTGACCCTGGCTGAA
GAAACCTTGTTGGAGCTGACCGCTGCCCAGGACAAACAGGTGAAGACCTACCTGTTCGGCCAGGAGATCAACCCTGAAAC
CTACGCCATCTGCAAGGCTGATATGCTGATGAAAGGTGAAGGAGAAAACGCCGACCATATTGTGGGCGGTGCTGAGTGGT
CTACCCTGGCGCACGATGCCTTCCCGGCCCATGAATTTGATTTCATGCTCTCCAATCCGCCCTACGGCAAGAGCTGGAAA
AAAGACCTGGACACCATGGGGGGCAAGGACGGCATCCGTGACTCCCGTTTCAAGATCACCCATGCCGATGATACTGACTA
TTCCCTGATAACCCGCTCCAGCGATGGTCAGATGATGTTTCTGGCCAACATGGTTGCCAAGATGAACCACACATCCCGGC
TGGGCAGTCGGATTGCCGAAGTCCACAACGGTTCCTCATTATTCACCGGCGATGCAGGTCAGGGGGAGAGCAACATCCGG
CGCTGGATCATTGAGAAAGACTGGCTGGAGGCCATTGTAGCCCTGCCGCTTAACCTGTTCTACAACACCGGCATTGCCAC
TTATATCTGGGTATTGTCCAACCGTAAGCCGGATCACCGCAAGGGCAAGGTACAGCTGATCGATGCCACCGCCTGGTTCA
AGCCGTTACGCAAGAACCTGGGCAAGAAGAACTGCGAGCTGTCCGATGATGATATCCAGCGCATCTGCGACACCTATCAA
TCCTTCACTGAATCAGAGCAGTCAAAGATTTTTCAGAACAAGGCATTCGGCTACTGGAAGGTCACGGTGGAGCGCCCGCT
GCGCCTGCACAGTCAGTTATCCCTTCCGGCCATTGAGTCATTACGTTTTGCCTCCGGGGATGAGGAGATTCGGACGCAGT
TGTATGAGGAGTTTGGTGATGTCCTGTTTGAACAGTTCAGCAGCATAGAGAAAGAACTGGCCAAGCGCCTGGCTGAATGG
GGTGCAGGCGATGACGAAGGGGAAGACGACGAAGCCCCCCGCAAGGGCCTCTCAGAGAAGAAAAAGAAAAAGCTGCTGGA
TGCCGGAACCTGGGCGCGTGATGCCCGGCTGATGGAAACTGCCCAGTCACTGCGGGATCTGCTGGGTGGCGATCTGTATG
AGGATCACAACCGCTTCCGCATTGATGTTGACACCGCCCTGAAGAAACTGGGCCGTAAGCTGCCTGCCGCTGAGCTGAAG
CTGATCCTCAAGGCAGTCAGTTGGCGGGTGGAAACAGCGCCACCGGTTATCGCCAGGCTGCACAAGCCGGGCAAGGCCAC
ACCTGATCCGTTGCGGGGGCTGTATCCCGTAACCATAGACGGTAAAGCATGCGTGGTTGAGTACGAGCCGGATACCGACC
TGCGTGATACTGAGCAGGTGCCGCTGTTGGAGGATGGCGGTATTGAGGCGTTTATTCAGCGGGAGGTGCTGCCCTATACA
CCGGATGCCTGGCTGGATGAGTCCAAGACCAAGATCGGTTATGAGATCAGCTTTACCCGGCATTTCTACAAACCGCAACC
GTTGCGGACCCTGGAAGAGATTCGTGCCGACATCCTGGCGGTGGAGCAGGAGGCGGAAGGGCTGCTGGATGATCTGTTGA
AGGGTAATGCAGCATGA

Protein sequence :
MDQATHNKIVSFIWGIADDVLRDLFKRGKYPDVILPMCVLRRLDAVLEPTKQAVLDTKQMLDDAGITEQKAALCEAAGQA
FYNTSRFTLRDLRSRANQQQLKLDFEDYLDGFSQNVQDILENFKFRNQISTLSKADAIGTLIEKFLDPDINVSPNPVLNS
DGSVRLPAMDNHSMGTVFEELVRKFNEDNNEEAGEHWTPRDAVKLMARLIFLPIADQVQSGSYQLYDGACGTGGMLTLAE
ETLLELTAAQDKQVKTYLFGQEINPETYAICKADMLMKGEGENADHIVGGAEWSTLAHDAFPAHEFDFMLSNPPYGKSWK
KDLDTMGGKDGIRDSRFKITHADDTDYSLITRSSDGQMMFLANMVAKMNHTSRLGSRIAEVHNGSSLFTGDAGQGESNIR
RWIIEKDWLEAIVALPLNLFYNTGIATYIWVLSNRKPDHRKGKVQLIDATAWFKPLRKNLGKKNCELSDDDIQRICDTYQ
SFTESEQSKIFQNKAFGYWKVTVERPLRLHSQLSLPAIESLRFASGDEEIRTQLYEEFGDVLFEQFSSIEKELAKRLAEW
GAGDDEGEDDEAPRKGLSEKKKKKLLDAGTWARDARLMETAQSLRDLLGGDLYEDHNRFRIDVDTALKKLGRKLPAAELK
LILKAVSWRVETAPPVIARLHKPGKATPDPLRGLYPVTIDGKACVVEYEPDTDLRDTEQVPLLEDGGIEAFIQREVLPYT
PDAWLDESKTKIGYEISFTRHFYKPQPLRTLEEIRADILAVEQEAEGLLDDLLKGNAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1769 NP_231404.1 DNA methylase HsdM Not tested VPI-2 Protein 3e-154 47
VC0395_A1367 YP_001217310.1 DNA methylase HsdM Not tested VPI-2 Protein 3e-154 47
VPI2_0017c ACA01834.1 DNA methylase HsdM Not tested VPI-2 Protein 6e-154 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Glov_2201 YP_001952437.1 N-6 DNA methylase VFG1102 Protein 1e-154 47