Gene Information

Name : Glov_1807 (Glov_1807)
Accession : YP_001952043.1
Strain : Geobacter lovleyi SZ
Genome accession: NC_010814
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1921319 - 1922017 bp
Length : 699 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rca:Rcas_2599 two component transcriptional regulator, winged helix family

DNA sequence : 
ATGCGTGTTCTGGTGGTTGAAGATGAGCGCAAGATTGCTGAAGCACTGAAGCTGGGGCTTGAGGCAGAAGGCTATCAGGT
GGTCACCGCAGCCAGCGGTGAAGAGGGATTTTTTTGCCTGAATGCCGACTATTTTGATCTGATGCTGCTTGATCTGATGC
TGCCGGGCCATGATGGTCTGGAAGTATTACAGACGTTGCGGGCCAAGGGTTTTACCCTGCCAGTACTGATTCTGACAGGG
CGGGACACGGTTGAAGACCGGGTCTTGGGCCTGGACAGCGGTGCCGATGACTACCTGGTCAAGCCGTTTGCCTTTCCTGA
GTTGCTGGCACGGATACGTCTATTATTGCGGCGCGGCAGACATGAAACGGCTAACGTGCTGACGCTGGCAGACCTTGAAC
TGAACCTGCCGACCCACCAGGCCCTCCGTGACGGGCAGCTGCTTGACCTGACCTCCCGTGAATTCGAACTGCTGGAATAT
CTGCTGCGGCATCAGGGACATGTGGTATCCCGCGAGATGCTGGCCCATGATGTCTGGAAGGTGCGAGAGCGCTCCACACC
GCTTGACAATGTCATTGACGTCAATATCGCCCGTCTGCGCCGTAAGCTGGATGGCCCCTTCCCGCTGAAACTGATCCGCA
CCATCCGTGGTGTCGGTTTTATGGCAACTGCCGAGGATGATCATGCCGCGGCTCAGTAA

Protein sequence : 
MRVLVVEDERKIAEALKLGLEAEGYQVVTAASGEEGFFCLNADYFDLMLLDLMLPGHDGLEVLQTLRAKGFTLPVLILTG
RDTVEDRVLGLDSGADDYLVKPFAFPELLARIRLLLRRGRHETANVLTLADLELNLPTHQALRDGQLLDLTSREFELLEY
LLRHQGHVVSREMLAHDVWKVRERSTPLDNVIDVNIARLRRKLDGPFPLKLIRTIRGVGFMATAEDDHAAAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-30 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 7e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Glov_1807 YP_001952043.1 winged helix family two component transcriptional regulator BAC0638 Protein 2e-29 48
Glov_1807 YP_001952043.1 winged helix family two component transcriptional regulator BAC0111 Protein 1e-33 47
Glov_1807 YP_001952043.1 winged helix family two component transcriptional regulator BAC0083 Protein 1e-33 47
Glov_1807 YP_001952043.1 winged helix family two component transcriptional regulator BAC0125 Protein 4e-33 46
Glov_1807 YP_001952043.1 winged helix family two component transcriptional regulator BAC0347 Protein 5e-32 46
Glov_1807 YP_001952043.1 winged helix family two component transcriptional regulator BAC0197 Protein 3e-34 45
Glov_1807 YP_001952043.1 winged helix family two component transcriptional regulator BAC0308 Protein 7e-31 44
Glov_1807 YP_001952043.1 winged helix family two component transcriptional regulator CP004022.1.gene3215. Protein 6e-23 43
Glov_1807 YP_001952043.1 winged helix family two component transcriptional regulator HE999704.1.gene1528. Protein 3e-19 42
Glov_1807 YP_001952043.1 winged helix family two component transcriptional regulator CP000647.1.gene4257. Protein 3e-20 41
Glov_1807 YP_001952043.1 winged helix family two component transcriptional regulator CP000034.1.gene3834. Protein 9e-21 41
Glov_1807 YP_001952043.1 winged helix family two component transcriptional regulator CP001138.1.gene4273. Protein 9e-21 41
Glov_1807 YP_001952043.1 winged helix family two component transcriptional regulator BAC0533 Protein 3e-20 41
Glov_1807 YP_001952043.1 winged helix family two component transcriptional regulator NC_002695.1.915041.p Protein 9e-21 41
Glov_1807 YP_001952043.1 winged helix family two component transcriptional regulator NC_002516.2.879194.p Protein 5e-26 41
Glov_1807 YP_001952043.1 winged helix family two component transcriptional regulator CP001918.1.gene5135. Protein 4e-17 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Glov_1807 YP_001952043.1 winged helix family two component transcriptional regulator VFG0473 Protein 8e-32 45
Glov_1807 YP_001952043.1 winged helix family two component transcriptional regulator VFG0596 Protein 1e-30 43
Glov_1807 YP_001952043.1 winged helix family two component transcriptional regulator VFG1390 Protein 1e-25 43