Gene Information

Name : Glov_1749 (Glov_1749)
Accession : YP_001951985.1
Strain : Geobacter lovleyi SZ
Genome accession: NC_010814
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG1985
EC number : 1.1.1.193
Position : 1860630 - 1861733 bp
Length : 1104 bp
Strand : +
Note : KEGG: ppd:Ppro_1596 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein

DNA sequence :
ATGTCAACATCAGACATTGCATACATGAAGCGGGCGATTTCCCTTGCACGGAAAGGGTTAGGCAGGACTGCTCCCAATCC
GGCTGTAGGCTGTGTGATTGTGTGCGACGGGGTGATTGTGGGGGAGGGGTGGCATAAAAAGGCCGGTACCCCCCATGCCG
AGGTGCATGCCCTGGCCATGGCCGGTGCTGCAGCCAAAGGGGCTGATGTCTATGTGACGCTTGAGCCCTGCTGCCATCAC
GGTAAGACTCCACCCTGTTGCGATGCGTTGATCGCCGCAGGTGTGCGGCGGGTGGTGGCCGGCATGGTTGATCCCTTTCT
GCAGGTGGCCGGCAAAGGATTGCAGACTTTGCGTCAGGCCGGTGTCCGGGTTGAAGTGGGGTTGCTGGAACAGCAGTGCA
AGGAGTTGAACAAGGGGTTTATCAAGTCTGTCACCACCGGTATGCCGTACCTGCTCTACAAGACCGCCATGACCATGGAC
GGTAATATTGCCACTGTCACCGGACATTCCCGCTGGGTCACCGGTGAGGAGTCCCGGCGTCTGGTGCATCGCCTGCGTGC
TCACTGTGATGCCGTCATGGTGGGGGTGGATACGGTGATTGCAGACAACCCGCAATTGACGGTCCGGCATGTCAGGGGGA
GAGATCCGCTGCGGGTGATTGTGGATACCCGCTTGCGTACTCCGGAAAGCGTTAACGTACTGAATGGCACTGATGCCGGT
AGAACCGTGATTGCCACCTGTGAGACAAATCCTGATATTCATCAGCGCTATTTGTCGCAGGGAGCGGACATACTGGTCTG
CCGGGAATATGACGGCCGGGTTGAAATGACTGATCTGCTGCGCAAACTGGCTGTCAGGGGGGTGCAGAGCATTCTGGTGG
AGGGCGGCAGCCGTCTGGCAGGCGATCTGTTGCAGCGCAATCTGATTGATGAATGTATTTTTTTCTATGCTCCAAAGGTA
GTGGGGAACGGTTTTGCTCCCTTTGCCATACAAGGAATAAGTACCATGGATGAAGCCATTCAACTAGAGGTGCAGCGGGT
TGGCATGTCCGGCCCCGACGTGGTGGTGTATGCCAGGCCGGTGGGTGTATGTTTACCGGTCTGA

Protein sequence :
MSTSDIAYMKRAISLARKGLGRTAPNPAVGCVIVCDGVIVGEGWHKKAGTPHAEVHALAMAGAAAKGADVYVTLEPCCHH
GKTPPCCDALIAAGVRRVVAGMVDPFLQVAGKGLQTLRQAGVRVEVGLLEQQCKELNKGFIKSVTTGMPYLLYKTAMTMD
GNIATVTGHSRWVTGEESRRLVHRLRAHCDAVMVGVDTVIADNPQLTVRHVRGRDPLRVIVDTRLRTPESVNVLNGTDAG
RTVIATCETNPDIHQRYLSQGADILVCREYDGRVEMTDLLRKLAVRGVQSILVEGGSRLAGDLLQRNLIDECIFFYAPKV
VGNGFAPFAIQGISTMDEAIQLEVQRVGMSGPDVVVYARPVGVCLPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 1e-34 43
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 1e-34 43